RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 LEAP2Q969E1 77 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 FXYD5Q96DB9 178 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 FREM1Q5H8C1 2179 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 IGKV3-7A0A075B6H7 116 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 C11orf86A6NJI1 115 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 H3BUX3 64 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 ORMDL1Q9P0S3 153 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 FUSP35637 526 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 RNF183Q96D59 192 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 DOCK10Q96BY6 2186 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 CHD3Q12873 2000 aaKnown RBP4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 TRAV4A0A0B4J268 109 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 J3QQQ9 107 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 NDUFC1O43677 76 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 MDKP21741 143 aaPredicted RBP4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 LINC01620Q4KN68 170 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 IMUPQ9GZP8 106 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 NDUFA12Q9UI09 145 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 V9GYY9 64 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 CHD5Q8TDI0 1954 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 IGHV3OR16-12A0A075B7B8 117 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 CGB1A6NKQ9 187 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 TIMM17BO60830 172 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 SPINK8P0C7L1 97 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 MRPL51Q4U2R6 128 aaKnown RBP4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 C8orf86Q6ZUL3 223 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 ZNF837Q96EG3 531 aaPredicted RBP4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 VSIG2Q96IQ7 327 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 UBE2E2Q96LR5 201 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 FNDC4Q9H6D8 234 aaPredicted RBP4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 MRPL36Q9P0J6 103 aaKnown RBP4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 USP9YO00507 2555 aaPredicted RBP4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 A0A0B4J2C4 111 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 E7EQL1 145 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 PRSS57Q6UWY2 283 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 ZNF664Q8N3J9 261 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 VPREB3Q9UKI3 123 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 SCN5AQ14524 2016 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 TRGV1A0A0A0MS02 117 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 WI2-2373I1.2A0A1W2PRP0 233 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 LGALS9O00182 355 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 BRI3O95415 125 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 CFC1P0CG37 223 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 SAA4P35542 130 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 DAD1P61803 113 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 ZC2HC1AQ96GY0 325 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 ZNF747Q9BV97 191 aa4.85□□□□□ -1.63
CCDC144A-212ENST00000470068 PINLYPA6NC86 204 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 DKK1O94907 266 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 ADAMTSL5Q6ZMM2 481 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 LYPD6Q86Y78 171 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 COL4A1P02462 1669 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 ODF1Q14990 250 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 Q8N1Y9 231 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 TP53TG1Q9Y2A0 90 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 DOCK9Q9BZ29 2069 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 C15orf53Q8NAA6 179 aa4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 POLR3KQ9Y2Y1 108 aaPredicted RBP4.84□□□□□ -1.63
CCDC144A-212ENST00000470068 GAGE12JA6NER3 117 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 K7EP13 123 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 NDUFB1O75438 58 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE7O76087 117 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE12FP0CL80 117 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE12GP0CL81 117 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE12IP0CL82 117 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE4Q13068 117 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 FAM222AQ5U5X8 452 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 ZNF491Q8N8L2 437 aa4.84□□□□□ -1.64
CCDC144A-212ENST00000470068 PCM1Q15154 2024 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 IGKV2-40A0A087WW87 121 aaPredicted RBP4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 IGKV2D-40P01614 121 aaPredicted RBP4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 IGHV4-39P01824 125 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 MPV17L2Q567V2 206 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 VSIRQ9H7M9 311 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 IGKV1-6A0A0C4DH72 117 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 hADV29S1A0JD25 119 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 PRB2P02812 416 aaPredicted RBP4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 FOXG1P55316 489 aaPredicted RBP4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 C5orf47Q569G3 176 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 IGLC7A0M8Q6 106 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 FGFBP3Q8TAT2 258 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 MDFICQ9P1T7 246 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 IGLV11-55A0A075B6I3 123 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 E9PLD3 99 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 RNF185Q96GF1 192 aa4.83□□□□□ -1.64
CCDC144A-212ENST00000470068 RLFQ13129 1914 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 MP68P56378 58 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 C9JAW5 83 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 APELAP0DMC3 54 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 FAM201AQ5SY85 155 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE2AQ6NT46 116 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 KLHL30-AS1Q8NEE0 82 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 IGF2BP2-AS1Q96M15 143 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 TMEM256-PLSCR3K7ERE1 68 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE5Q13069 117 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 GAGE6Q13070 117 aa4.82□□□□□ -1.64
CCDC144A-212ENST00000470068 EXOC3-AS1Q8N2X6 119 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms