RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CXorf65A6NEN9 183 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 GPX1P07203 203 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 RBMY1A1P0DJD3 496 aaKnown RBP5.95□□□□□ -1.46
NPHP3-204ENST00000469232 RBMY1CP0DJD4 496 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 MGST1P10620 155 aaKnown RBP5.95□□□□□ -1.46
NPHP3-204ENST00000469232 BTN1A1Q13410 526 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 RBMY1FQ15415 496 aaKnown RBP5.95□□□□□ -1.46
NPHP3-204ENST00000469232 SPINK13Q1W4C9 94 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 IBA57Q5T440 356 aaKnown RBP5.95□□□□□ -1.46
NPHP3-204ENST00000469232 OR10G8Q8NGN5 311 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 YPEL4Q96NS1 127 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 GFRA4Q9GZZ7 299 aa5.95□□□□□ -1.46
NPHP3-204ENST00000469232 RNASE7Q9H1E1 156 aaKnown RBP5.95□□□□□ -1.46
NPHP3-204ENST00000469232 SMIM27A0A1W2PRY6 76 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 M0R036 132 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 M0R2Z0 102 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 ERVFC1-1P60608 527 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 NUTF2P61970 127 aaKnown RBP5.94□□□□□ -1.46
NPHP3-204ENST00000469232 Q6ZQT7 251 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 C1orf158Q8N1D5 194 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 TMEM256Q8N2U0 113 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 C15orf54Q8N8G6 183 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 C1QTNF4Q9BXJ3 329 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 RPP21Q9H633 154 aaKnown RBP5.94□□□□□ -1.46
NPHP3-204ENST00000469232 SRD5A3Q9H8P0 318 aa5.94□□□□□ -1.46
NPHP3-204ENST00000469232 LOC102724200A0A096LPH7 203 aaPredicted RBP5.93□□□□□ -1.46
NPHP3-204ENST00000469232 A8MWL6 223 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 UBE2CO00762 179 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 GATCO43716 136 aaKnown RBP5.93□□□□□ -1.46
NPHP3-204ENST00000469232 IGKV3-20P01619 116 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 P01737 135 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 IGLC6P0CF74 106 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 IGHV4-30-4P0DP06 118 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 RNASE4P34096 147 aaKnown RBP5.93□□□□□ -1.46
NPHP3-204ENST00000469232 RPS20P60866 119 aaKnown RBP5.93□□□□□ -1.46
NPHP3-204ENST00000469232 ANXA2RQ3ZCQ2 193 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 ZNF705AQ6ZN79 300 aaPredicted RBP5.93□□□□□ -1.46
NPHP3-204ENST00000469232 TSKUQ8WUA8 353 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 PYGO2Q9BRQ0 406 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 CNFNQ9BYD5 112 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 CSTL1Q9H114 145 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 SCRT2Q9NQ03 307 aa5.93□□□□□ -1.46
NPHP3-204ENST00000469232 TRAV9-1A0A075B6T8 112 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 H7BYZ3 331 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 INSP01308 110 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 MED14OSP0DP75 135 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 PRR27Q6MZM9 219 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 DAZAP1Q96EP5 407 aaKnown RBP5.92□□□□□ -1.46
NPHP3-204ENST00000469232 KCNS1Q96KK3 526 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 NEU1Q99519 415 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 IL36BQ9NZH7 164 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 TRAV12-2A0A075B6T6 113 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 IGHV1OR15-1A0A075B7D0 117 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 TRAV12-3A0A0B4J271 114 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 SNAI2O43623 268 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 OR5AL1P0C617 328 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 CTRLP40313 264 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 APOC4P55056 127 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 WDR73Q6P4I2 378 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 Q6ZWC4 215 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 OR2D3Q8NGH3 330 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 GTSF1Q8WW33 167 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 PTH2Q96A98 100 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 RPS10P5Q9NQ39 176 aa5.92□□□□□ -1.46
NPHP3-204ENST00000469232 TRBV24-1A0A075B6N3 115 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 IGHV4-4A0A075B6R2 117 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 A0A1W2PPQ1 181 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 XKRY2A2RUG3 117 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 TMEM189A5PLL7 270 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 ZNF705GA8MUZ8 300 aaPredicted RBP5.91□□□□□ -1.46
NPHP3-204ENST00000469232 K7EIL1 84 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 NXPH4O95158 308 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 RPL35AP18077 110 aaKnown RBP5.91□□□□□ -1.46
NPHP3-204ENST00000469232 RPL19P84098 196 aaKnown RBP5.91□□□□□ -1.46
NPHP3-204ENST00000469232 IL17DQ8TAD2 202 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 C9orf85Q96MD7 179 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 SMCO4Q9NRQ5 59 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 XCL2Q9UBD3 114 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 TP53TG1Q9Y2A0 90 aa5.91□□□□□ -1.46
NPHP3-204ENST00000469232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
NPHP3-204ENST00000469232 IGHV3-16A0A0C4DH30 117 aa5.9□□□□□ -1.46
NPHP3-204ENST00000469232 CA1P00915 261 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-204ENST00000469232 ORM1P02763 201 aa5.9□□□□□ -1.46
NPHP3-204ENST00000469232 TYMSP04818 313 aa5.9□□□□□ -1.46
NPHP3-204ENST00000469232 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.46
NPHP3-204ENST00000469232 FXYD7P58549 80 aa5.9□□□□□ -1.46
NPHP3-204ENST00000469232 PIK3CD-AS1Q5SR53 167 aa5.9□□□□□ -1.46
NPHP3-204ENST00000469232 GATD1Q8NB37 220 aa5.9□□□□□ -1.46
NPHP3-204ENST00000469232 C11orf72Q8NBR9 251 aa5.9□□□□□ -1.46
NPHP3-204ENST00000469232 A0A1B0GXF2 115 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 F2Z2F3 143 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 SPRY2O43597 315 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 ELOBQ15370 118 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 FAM159AQ6UWV7 190 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 NUP35Q8NFH5 326 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 RNASE8Q8TDE3 154 aaKnown RBP5.89□□□□□ -1.47
NPHP3-204ENST00000469232 NAT8BQ9UHF3 227 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 GOLT1BQ9Y3E0 138 aa5.89□□□□□ -1.47
NPHP3-204ENST00000469232 X6R8D5 127 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms