RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
TRIM56-203ENST00000467847 TRAV21A0A0B4J279 112 aa11.62□□□□□ -0.55
TRIM56-203ENST00000467847 PGPA6NDG6 321 aa11.62□□□□□ -0.55
TRIM56-203ENST00000467847 F6UZH7 168 aa11.62□□□□□ -0.55
TRIM56-203ENST00000467847 PSCAO43653 123 aa11.62□□□□□ -0.55
TRIM56-203ENST00000467847 EIF3GO75821 320 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRIM56-203ENST00000467847 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-203ENST00000467847 H2BFSP57053 126 aa11.62□□□□□ -0.55
TRIM56-203ENST00000467847 GOLT1AQ6ZVE7 132 aa11.62□□□□□ -0.55
TRIM56-203ENST00000467847 SMIM3Q9BZL3 60 aa11.62□□□□□ -0.55
TRIM56-203ENST00000467847 FLG2Q5D862 2391 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-203ENST00000467847 IGHV3-38A0A0C4DH36 116 aa11.61□□□□□ -0.55
TRIM56-203ENST00000467847 TYMSP04818 313 aa11.61□□□□□ -0.55
TRIM56-203ENST00000467847 GATA1P15976 413 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-203ENST00000467847 TIRAPP58753 221 aa11.61□□□□□ -0.55
TRIM56-203ENST00000467847 LINC00299Q6ZSB3 139 aa11.61□□□□□ -0.55
TRIM56-203ENST00000467847 SDF2L1Q9HCN8 221 aa11.61□□□□□ -0.55
TRIM56-203ENST00000467847 MYCBP2O75592 4640 aa11.61□□□□□ -0.55
TRIM56-203ENST00000467847 VPS13BQ7Z7G8 4022 aa11.61□□□□□ -0.55
TRIM56-203ENST00000467847 IGLV5-52A0A0A0MRZ9 124 aa11.6□□□□□ -0.55
TRIM56-203ENST00000467847 PET100P0DJ07 73 aa11.6□□□□□ -0.55
TRIM56-203ENST00000467847 TVP23CQ96ET8 276 aa11.6□□□□□ -0.55
TRIM56-203ENST00000467847 KCNS1Q96KK3 526 aa11.6□□□□□ -0.55
TRIM56-203ENST00000467847 TREM1Q9NP99 234 aa11.6□□□□□ -0.55
TRIM56-203ENST00000467847 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 INMT-MINDY4F8WBC2 141 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 J3QL48 77 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 UPK1BO75841 260 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 MPC2O95563 127 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 RPL12P30050 165 aaKnown RBP11.59□□□□□ -0.55
TRIM56-203ENST00000467847 HAMPP81172 84 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 LINC01556Q5JQF7 62 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 PQLC2Q6ZP29 291 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 ASB13Q8WXK3 278 aa11.59□□□□□ -0.55
TRIM56-203ENST00000467847 A0A1W2PPV4 95 aa11.58□□□□□ -0.56
TRIM56-203ENST00000467847 LRCOL1A6NCL2 159 aa11.58□□□□□ -0.56
TRIM56-203ENST00000467847 FBLL1A6NHQ2 334 aaKnown RBP11.58□□□□□ -0.56
TRIM56-203ENST00000467847 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
TRIM56-203ENST00000467847 SSNA1O43805 119 aa11.58□□□□□ -0.56
TRIM56-203ENST00000467847 PFN1P07737 140 aaKnown RBP11.58□□□□□ -0.56
TRIM56-203ENST00000467847 GNG5P63218 68 aa11.58□□□□□ -0.56
TRIM56-203ENST00000467847 ACOT6Q3I5F7 207 aaPredicted RBP11.58□□□□□ -0.56
TRIM56-203ENST00000467847 ARL6IP6Q8N6S5 226 aa11.58□□□□□ -0.56
TRIM56-203ENST00000467847 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
TRIM56-203ENST00000467847 TRAV8-6A0A0B4J262 113 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 ZNF876PQ49A33 203 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 OR10J3Q5JRS4 329 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 SLC25A29Q8N8R3 303 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 PRADC1Q9BSG0 188 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 TMEM70Q9BUB7 260 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 Q9HAA7 133 aa11.57□□□□□ -0.56
TRIM56-203ENST00000467847 HMGB3O15347 200 aaKnown RBP11.56□□□□□ -0.56
TRIM56-203ENST00000467847 RAB2AP61019 212 aa11.56□□□□□ -0.56
TRIM56-203ENST00000467847 NDFIP1Q9BT67 221 aa11.56□□□□□ -0.56
TRIM56-203ENST00000467847 WFDC1Q9HC57 220 aa11.56□□□□□ -0.56
TRIM56-203ENST00000467847 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
TRIM56-203ENST00000467847 IFITM3Q01628 133 aa11.55□□□□□ -0.56
TRIM56-203ENST00000467847 RHOHQ15669 191 aa11.55□□□□□ -0.56
TRIM56-203ENST00000467847 CFAP126Q5VTH2 177 aa11.55□□□□□ -0.56
TRIM56-203ENST00000467847 Q8N814 137 aa11.55□□□□□ -0.56
TRIM56-203ENST00000467847 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
TRIM56-203ENST00000467847 MARVELD1Q9BSK0 173 aa11.55□□□□□ -0.56
TRIM56-203ENST00000467847 IGHV3-73A0A0B4J1V6 119 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 TRBV6-4A0A1B0GX49 114 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 RS1O15537 224 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 CIDEAO60543 219 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 IGHV3-30P01768 117 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 IGHV3-33P01772 117 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 IGHV3-30-3P0DP02 117 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 IGHV3-30-5P0DP03 117 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 Q6ZSN1 163 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 OR10G9Q8NGN4 311 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 OR10G7Q8NGN6 311 aa11.54□□□□□ -0.56
TRIM56-203ENST00000467847 SERTM2A0A1B0GWG4 89 aa11.53□□□□□ -0.56
TRIM56-203ENST00000467847 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
TRIM56-203ENST00000467847 LELP1Q5T871 98 aa11.53□□□□□ -0.56
TRIM56-203ENST00000467847 DPPA3Q6W0C5 159 aa11.53□□□□□ -0.56
TRIM56-203ENST00000467847 C11orf21Q9P2W6 132 aa11.53□□□□□ -0.56
TRIM56-203ENST00000467847 TAAR5O14804 337 aa11.52□□□□□ -0.57
TRIM56-203ENST00000467847 ZNF80P51504 273 aaPredicted RBP11.52□□□□□ -0.57
TRIM56-203ENST00000467847 K7EQM0 130 aa11.51□□□□□ -0.57
TRIM56-203ENST00000467847 GCGP01275 180 aa11.51□□□□□ -0.57
TRIM56-203ENST00000467847 TCRAP04437 139 aa11.51□□□□□ -0.57
TRIM56-203ENST00000467847 CDC34P49427 236 aaPredicted RBP11.51□□□□□ -0.57
TRIM56-203ENST00000467847 C5orf17Q8NAS9 161 aa11.51□□□□□ -0.57
TRIM56-203ENST00000467847 ATP6V0E2Q8NHE4 81 aa11.51□□□□□ -0.57
TRIM56-203ENST00000467847 C9orf85Q96MD7 179 aa11.51□□□□□ -0.57
TRIM56-203ENST00000467847 GTSF1LQ9H1H1 148 aa11.51□□□□□ -0.57
TRIM56-203ENST00000467847 MGST1P10620 155 aaKnown RBP11.5□□□□□ -0.57
TRIM56-203ENST00000467847 LAGE3Q14657 143 aa11.5□□□□□ -0.57
TRIM56-203ENST00000467847 ZFP69Q49AA0 526 aa11.5□□□□□ -0.57
TRIM56-203ENST00000467847 ZNF506Q5JVG8 444 aa11.5□□□□□ -0.57
TRIM56-203ENST00000467847 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
TRIM56-203ENST00000467847 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
TRIM56-203ENST00000467847 PGPEP1LA6NFU8 196 aa11.49□□□□□ -0.57
TRIM56-203ENST00000467847 STAG3L2P0CL84 134 aa11.49□□□□□ -0.57
TRIM56-203ENST00000467847 STAG3L3P0CL85 134 aa11.49□□□□□ -0.57
TRIM56-203ENST00000467847 PTH2Q96A98 100 aa11.49□□□□□ -0.57
TRIM56-203ENST00000467847 TM2D2Q9BX73 214 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms