RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
SCAF4-204ENST00000467731 SDF2L1Q9HCN8 221 aa5.19□□□□□ -1.58
SCAF4-204ENST00000467731 TEX48A0A1B0GUV7 120 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 IFNA1P01562 189 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 GP9P14770 177 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 SIGLEC15Q6ZMC9 328 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 BPIFA4PQ86YQ2 179 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 TECRQ9NZ01 308 aaKnown RBP5.18□□□□□ -1.58
SCAF4-204ENST00000467731 MGAM2Q2M2H8 2515 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 IGKV3-7A0A075B6H7 116 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 SMIM9A6NGZ8 99 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 MRPS12O15235 138 aaKnown RBP5.18□□□□□ -1.58
SCAF4-204ENST00000467731 RPL7P18124 248 aaKnown RBP5.18□□□□□ -1.58
SCAF4-204ENST00000467731 GALR1P47211 349 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 PQLC2Q6ZP29 291 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 DYNLRB2Q8TF09 96 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 GRAMD2BQ96HH9 432 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 SIGLEC8Q9NYZ4 499 aa5.18□□□□□ -1.58
SCAF4-204ENST00000467731 NUDT3O95989 172 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 KRTDAPP60985 99 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 RPL11P62913 178 aaKnown RBP5.17□□□□□ -1.58
SCAF4-204ENST00000467731 PMCHL1Q16048 86 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 KRTAP21-3Q3LHN1 58 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 MRPL54Q6P161 138 aaKnown RBP5.17□□□□□ -1.58
SCAF4-204ENST00000467731 MBD3L1Q8WWY6 194 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 AP1S3Q96PC3 154 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 ASCL2Q99929 193 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 PAXXQ9BUH6 204 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 SAMD10Q9BYL1 202 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 SMAD5-AS1Q9Y6J3 95 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 NBEAL1Q6ZS30 2694 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 FAM231BA6NCW3 169 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 H3BTX0 84 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 ZNF253O75346 499 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 CXorf1O96002 111 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 UBE2L3P68036 154 aaKnown RBP5.17□□□□□ -1.58
SCAF4-204ENST00000467731 CCL20P78556 96 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 WFDC9Q8NEX5 89 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 C17orf77Q96MU5 243 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 C1QTNF4Q9BXJ3 329 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 TRAPPC1Q9Y5R8 145 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 NOTCH1P46531 2555 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 DNAH3Q8TD57 4116 aa5.17□□□□□ -1.58
SCAF4-204ENST00000467731 MUC21A0A0G2JKD1 596 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 MUC21A0A140T8X8 626 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 DEFB114Q30KQ6 69 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 MUC21Q5SSG8 566 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 FAM90A2PQ658T7 463 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 TMEM61Q8N0U2 210 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 OR2K2Q8NGT1 345 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 FXYD5Q96DB9 178 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 TMEM14CQ9P0S9 112 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 CYSLTR1Q9Y271 337 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 GCHFRP30047 84 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 ST20Q9HBF5 79 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 TRAV9-2A0A087WT02 112 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 TRAV1-1A0A0B4J248 108 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 C7orf71A4D174 169 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 IZUMO1RA6ND01 250 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 GAGE12JA6NER3 117 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 ZNF785A8K8V0 405 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 GAGE7O76087 117 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 IGLV1-51P01701 117 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 GAGE12FP0CL80 117 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 GAGE12GP0CL81 117 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 GAGE12IP0CL82 117 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 HIST1H1EP10412 219 aaKnown RBP5.16□□□□□ -1.58
SCAF4-204ENST00000467731 IGLL1P15814 213 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 GAGE4Q13068 117 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 RBPMS2Q6ZRY4 209 aaKnown RBP5.16□□□□□ -1.58
SCAF4-204ENST00000467731 MS4A6AQ9H2W1 248 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 NRN1Q9NPD7 142 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 NAT8BQ9UHF3 227 aa5.16□□□□□ -1.58
SCAF4-204ENST00000467731 C9orf118A6NHY6 69 aa5.15□□□□□ -1.58
SCAF4-204ENST00000467731 HBE1P02100 147 aa5.15□□□□□ -1.58
SCAF4-204ENST00000467731 SPINK8P0C7L1 97 aa5.15□□□□□ -1.58
SCAF4-204ENST00000467731 C9orf66Q5T8R8 295 aa5.15□□□□□ -1.58
SCAF4-204ENST00000467731 KCNIP4Q6PIL6 250 aa5.15□□□□□ -1.58
SCAF4-204ENST00000467731 DCANP1Q8TF63 244 aa5.15□□□□□ -1.58
SCAF4-204ENST00000467731 AGRNO00468 2067 aa5.15□□□□□ -1.58
SCAF4-204ENST00000467731 TRBV19A0A075B6N1 114 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 A0A087X0K7 114 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 A0A1W2PRE2 83 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 FABP5P3A8MUU1 101 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 SERF1AO75920 110 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 GPX1P07203 203 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 INSL3P51460 131 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 WFDC3Q8IUB2 231 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 MCRIP2Q9BUT9 160 aaKnown RBP5.15□□□□□ -1.59
SCAF4-204ENST00000467731 TMEM167BQ9NRX6 74 aa5.15□□□□□ -1.59
SCAF4-204ENST00000467731 NDUFB4O95168 129 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 PSMB3P49720 205 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 PDE6HQ13956 83 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 IGFL4Q6B9Z1 124 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 GNG13Q9P2W3 67 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 A6NDN8 102 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 LINC00310P59036 64 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 SEC11AP67812 179 aa5.14□□□□□ -1.59
SCAF4-204ENST00000467731 OXLD1Q5BKU9 147 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms