RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 PRG4Q92954 1404 aaPredicted RBP1.26□□□□□ -2.21
SMC4-208ENST00000467468 IGF2P01344 180 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 GYPBP06028 91 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 EFNA4P52798 201 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 FXYD4P59646 89 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 CCDC58Q4VC31 144 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 CLLU1Q5K131 121 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 CTAGE3PQ8IX95 158 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 TSTD1Q8NFU3 115 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 TPT1P8Q9HAU6 139 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 LSM2Q9Y333 95 aaKnown RBP1.26□□□□□ -2.21
SMC4-208ENST00000467468 DLG5Q8TDM6 1919 aa1.25□□□□□ -2.21
SMC4-208ENST00000467468 TRBV20-1A0A075B6N2 111 aa1.25□□□□□ -2.21
SMC4-208ENST00000467468 TMEM30CPA0ZSE6 113 aa1.25□□□□□ -2.21
SMC4-208ENST00000467468 NUPR2A6NF83 97 aa1.25□□□□□ -2.21
SMC4-208ENST00000467468 ATP11AUNQ6ZP68 121 aa1.25□□□□□ -2.21
SMC4-208ENST00000467468 ATP6V0E2Q8NHE4 81 aa1.25□□□□□ -2.21
SMC4-208ENST00000467468 MED13Q9UHV7 2174 aa1.25□□□□□ -2.21
SMC4-208ENST00000467468 FAM236AA0A1B0GUQ0 79 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 FAM236BA0A1B0GV22 79 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 M0R2P5 195 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 NDUFA2O43678 99 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 RPL37AP61513 92 aaKnown RBP1.24□□□□□ -2.21
SMC4-208ENST00000467468 LYPD5Q6UWN5 251 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 SLC25A26Q70HW3 274 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 FAM107BQ9H098 131 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 TAS2R8Q9NYW2 309 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 MRPL36Q9P0J6 103 aaKnown RBP1.24□□□□□ -2.21
SMC4-208ENST00000467468 MYH1P12882 1939 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 UNC13CQ8NB66 2214 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 KIDINS220Q9ULH0 1771 aa1.24□□□□□ -2.21
SMC4-208ENST00000467468 MYO18AQ92614 2054 aaKnown RBP1.24□□□□□ -2.21
SMC4-208ENST00000467468 PTPRDP23468 1912 aa1.23□□□□□ -2.21
SMC4-208ENST00000467468 TECTAO75443 2155 aa1.23□□□□□ -2.21
SMC4-208ENST00000467468 TRAV2A0A0B4J234 112 aa1.23□□□□□ -2.21
SMC4-208ENST00000467468 A0A0G2JMM0 328 aa1.23□□□□□ -2.21
SMC4-208ENST00000467468 K7ERU9 68 aa1.23□□□□□ -2.21
SMC4-208ENST00000467468 RPS25P62851 125 aaKnown RBP1.23□□□□□ -2.21
SMC4-208ENST00000467468 LINC00575Q6W349 94 aa1.23□□□□□ -2.21
SMC4-208ENST00000467468 ZCCHC6Q5VYS8 1495 aaKnown RBP1.23□□□□□ -2.21
SMC4-208ENST00000467468 CCDC171Q6TFL3 1326 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.22□□□□□ -2.21
SMC4-208ENST00000467468 NPFFO15130 113 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 TPST1O60507 370 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 IGKCP01834 107 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 IL7P13232 177 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 SNX29P2Q8IUI4 249 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 DMAC1Q96GE9 116 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 SAR1AQ9NR31 198 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 MRPL35Q9NZE8 188 aaKnown RBP1.22□□□□□ -2.21
SMC4-208ENST00000467468 ERG28Q9UKR5 140 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 NOP16Q9Y3C1 178 aaKnown RBP1.22□□□□□ -2.21
SMC4-208ENST00000467468 CTTNBP2Q8WZ74 1663 aa1.22□□□□□ -2.21
SMC4-208ENST00000467468 ANK1P16157 1881 aa1.21□□□□□ -2.22
SMC4-208ENST00000467468 POLR2JP52435 117 aaKnown RBP1.21□□□□□ -2.22
SMC4-208ENST00000467468 DEFB132Q7Z7B7 95 aa1.21□□□□□ -2.22
SMC4-208ENST00000467468 ATOH7Q8N100 152 aa1.21□□□□□ -2.22
SMC4-208ENST00000467468 PPDPFLQ8WWR9 84 aa1.21□□□□□ -2.22
SMC4-208ENST00000467468 CHD3Q12873 2000 aaKnown RBP1.21□□□□□ -2.22
SMC4-208ENST00000467468 VIRMAQ69YN4 1812 aaKnown RBP1.21□□□□□ -2.22
SMC4-208ENST00000467468 TENM1Q9UKZ4 2725 aa1.21□□□□□ -2.22
SMC4-208ENST00000467468 MUC4Q99102 2169 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 COPZ1P61923 177 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 UNQ5815/PRO19632Q6UWF5 114 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 DYNLRB2Q8TF09 96 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 ATG5Q9H1Y0 275 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 BICRAQ9NZM4 1560 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 CDK5RAP2Q96SN8 1893 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 FANCMQ8IYD8 2048 aa1.2□□□□□ -2.22
SMC4-208ENST00000467468 FCGBPQ9Y6R7 5405 aaPredicted RBP1.2□□□□□ -2.22
SMC4-208ENST00000467468 ERCC6Q03468 1493 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 LRP5O75197 1615 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 FLG2Q5D862 2391 aaPredicted RBP1.19□□□□□ -2.22
SMC4-208ENST00000467468 CXorf51AA0A1B0GTR3 108 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 HIGD1CA8MV81 97 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 ZNF670-ZNF695F2Z2N8 137 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 J3QLW9 94 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 XAF1Q6GPH4 301 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 Q6ZQY7 126 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 Q8N6K4 173 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 TSC22D3Q99576 134 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 VPS25Q9BRG1 176 aa1.19□□□□□ -2.22
SMC4-208ENST00000467468 NCOA6Q14686 2063 aaPredicted RBP1.19□□□□□ -2.22
SMC4-208ENST00000467468 HELZP42694 1942 aaKnown RBP1.19□□□□□ -2.22
SMC4-208ENST00000467468 TET1Q8NFU7 2136 aa1.18□□□□□ -2.22
SMC4-208ENST00000467468 TRAV17A0A0B4J275 112 aa1.18□□□□□ -2.22
SMC4-208ENST00000467468 TRBV10-1A0A0K0K1A3 114 aa1.18□□□□□ -2.22
SMC4-208ENST00000467468 TRBV30A0A0K0K1B3 111 aa1.17□□□□□ -2.22
SMC4-208ENST00000467468 K7EP13 123 aa1.17□□□□□ -2.22
SMC4-208ENST00000467468 M0R129 80 aa1.17□□□□□ -2.22
SMC4-208ENST00000467468 IQCJQ1A5X6 159 aa1.17□□□□□ -2.22
SMC4-208ENST00000467468 CCL19Q99731 98 aa1.17□□□□□ -2.22
SMC4-208ENST00000467468 COL6A6A6NMZ7 2263 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 NBDYA0A0U1RRE5 68 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 PITX3O75364 302 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 CCKP06307 115 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 SELENOWP63302 87 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 MIC13Q5XKP0 118 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 SCIMPQ6UWF3 145 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 SDF2Q99470 211 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms