RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 KRTAP10-11P60412 298 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 RPS20P60866 119 aaKnown RBP9.52□□□□□ -0.89
COL4A1-202ENST00000467182 GTSCR1Q86UQ5 136 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 NAT8BQ9UHF3 227 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
COL4A1-202ENST00000467182 HIGD1CA8MV81 97 aa9.51□□□□□ -0.89
COL4A1-202ENST00000467182 TYMSP04818 313 aa9.51□□□□□ -0.89
COL4A1-202ENST00000467182 FRMD6-AS1P0C7T7 363 aa9.51□□□□□ -0.89
COL4A1-202ENST00000467182 ANXA2RQ3ZCQ2 193 aa9.51□□□□□ -0.89
COL4A1-202ENST00000467182 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
COL4A1-202ENST00000467182 RAB5AP20339 215 aa9.5□□□□□ -0.89
COL4A1-202ENST00000467182 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
COL4A1-202ENST00000467182 MUC21Q5SSG8 566 aa9.5□□□□□ -0.89
COL4A1-202ENST00000467182 DNLZQ5SXM8 178 aa9.5□□□□□ -0.89
COL4A1-202ENST00000467182 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
COL4A1-202ENST00000467182 BTF3L4Q96K17 158 aa9.5□□□□□ -0.89
COL4A1-202ENST00000467182 FAM210BQ96KR6 192 aa9.5□□□□□ -0.89
COL4A1-202ENST00000467182 A0A1B0GXF2 115 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 G3V4G9 280 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 GNRH2O43555 120 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 AMBPP02760 352 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 CTRLP40313 264 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 RIPPLY3P57055 190 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 PGLYRP4Q96LB8 373 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 SRD5A3Q9H8P0 318 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 TP53TG3Q9ULZ0 132 aa9.49□□□□□ -0.89
COL4A1-202ENST00000467182 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 XKRY2A2RUG3 117 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 SNAI2O43623 268 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 SPINK4O60575 86 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 INSP01308 110 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
COL4A1-202ENST00000467182 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 FER1L6-AS1Q8NA97 138 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 CSNK1G2-AS1Q8NCQ2 148 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 C20orf144Q9BQM9 153 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 LINC00467Q9BRT7 94 aa9.48□□□□□ -0.89
COL4A1-202ENST00000467182 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
COL4A1-202ENST00000467182 NOTCH3Q9UM47 2321 aa9.47□□□□□ -0.89
COL4A1-202ENST00000467182 PHOX2AO14813 284 aa9.47□□□□□ -0.89
COL4A1-202ENST00000467182 ARMS2P0C7Q2 107 aa9.47□□□□□ -0.89
COL4A1-202ENST00000467182 MRPL54Q6P161 138 aaKnown RBP9.47□□□□□ -0.89
COL4A1-202ENST00000467182 MORN3Q6PF18 240 aaPredicted RBP9.47□□□□□ -0.89
COL4A1-202ENST00000467182 CNFNQ9BYD5 112 aa9.47□□□□□ -0.89
COL4A1-202ENST00000467182 SCRT2Q9NQ03 307 aa9.47□□□□□ -0.89
COL4A1-202ENST00000467182 XCL2Q9UBD3 114 aa9.47□□□□□ -0.89
COL4A1-202ENST00000467182 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
COL4A1-202ENST00000467182 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.9
COL4A1-202ENST00000467182 NUTF2P61970 127 aaKnown RBP9.46□□□□□ -0.9
COL4A1-202ENST00000467182 FAM159AQ6UWV7 190 aa9.46□□□□□ -0.9
COL4A1-202ENST00000467182 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
COL4A1-202ENST00000467182 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.9
COL4A1-202ENST00000467182 KCNS1Q96KK3 526 aa9.46□□□□□ -0.9
COL4A1-202ENST00000467182 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
COL4A1-202ENST00000467182 PKD1L1Q8TDX9 2849 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 IGHV3-16A0A0C4DH30 117 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 A0A1B0GUT8 65 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 PRM2P04554 102 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 MED14OSP0DP75 135 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 ASIPP42127 132 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 RPS10P46783 165 aaKnown RBP9.45□□□□□ -0.9
COL4A1-202ENST00000467182 GATD1Q8NB37 220 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
COL4A1-202ENST00000467182 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 MUC21A0A140T8X8 626 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 H3BVH4 76 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 WDR73Q6P4I2 378 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 RASL11AQ6T310 242 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 OR10AG1Q8NH19 301 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 CSTL1Q9H114 145 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
COL4A1-202ENST00000467182 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 LOC102724200A0A096LPH7 203 aaPredicted RBP9.43□□□□□ -0.9
COL4A1-202ENST00000467182 F2Z2F3 143 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 SPRY2O43597 315 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 IGHV4-30-4P0DP06 118 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 HBBP68871 147 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 KRTAP21-3Q3LHN1 58 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 LINC01587Q99440 93 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 GNB1LQ9BYB4 327 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 MSRB1Q9NZV6 116 aa9.43□□□□□ -0.9
COL4A1-202ENST00000467182 MUC4Q99102 2169 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 KIR2DL5BA0A0G2JN68 375 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 KIR2DL5BA0A0G2JPC4 375 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 CBY3A6NI87 242 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 A8MZ25 164 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 SNURFLB1AK76 121 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 NXPH4O95158 308 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 TRGC2P03986 189 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 NTF3P20783 257 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 CAMPP49913 170 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 RIGQ13278 110 aa9.42□□□□□ -0.9
COL4A1-202ENST00000467182 COX19Q49B96 90 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms