RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 AMTNQ6UX39 209 aa11.4□□□□□ -0.58
RRP1-201ENST00000467112 SMIM2Q9BVW6 85 aa11.4□□□□□ -0.58
RRP1-201ENST00000467112 H3BMG7 143 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 K7ENP7 123 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 PLNP26678 52 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 FOXI2Q6ZQN5 318 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 C16orf92Q96LL3 132 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 IGHV4-4A0A075B6R2 117 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 M0R381 172 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 SAA4P35542 130 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 MTURNQ8N3F0 131 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 EEF1AKMT3Q96AZ1 226 aa11.39□□□□□ -0.59
RRP1-201ENST00000467112 DEFB1P60022 68 aa11.38□□□□□ -0.59
RRP1-201ENST00000467112 C20orf173Q96LM9 149 aa11.38□□□□□ -0.59
RRP1-201ENST00000467112 LINC00527Q9UJ94 153 aa11.38□□□□□ -0.59
RRP1-201ENST00000467112 F8VRH5 84 aa11.38□□□□□ -0.59
RRP1-201ENST00000467112 FOXC1Q12948 553 aa11.38□□□□□ -0.59
RRP1-201ENST00000467112 H7C1H1 209 aa11.38□□□□□ -0.59
RRP1-201ENST00000467112 ADORA2A-AS1P86434 159 aa11.38□□□□□ -0.59
RRP1-201ENST00000467112 MRPL53Q96EL3 112 aaKnown RBP11.38□□□□□ -0.59
RRP1-201ENST00000467112 RPL39LQ96EH5 51 aaKnown RBP11.37□□□□□ -0.59
RRP1-201ENST00000467112 SCGB3A1Q96QR1 104 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 IGF2RP11717 2491 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 TAL2Q16559 108 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 LCNL1Q6ZST4 164 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 SH2D6Q7Z4S9 175 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 HIF1ANQ9NWT6 349 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 U3KQE9 123 aa11.37□□□□□ -0.59
RRP1-201ENST00000467112 UBE2E1P51965 193 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 KLK9Q2XQG4 91 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 RASL10AQ92737 203 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 SPANXB1Q9NS25 103 aaPredicted RBP11.36□□□□□ -0.59
RRP1-201ENST00000467112 KLK9Q9UKQ9 250 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 CHTOPQ9Y3Y2 248 aaKnown RBP11.36□□□□□ -0.59
RRP1-201ENST00000467112 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 TRBV7-1A0A0A6YYK4 115 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 A0A1W2PPR1 153 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 OR11H12B2RN74 326 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
RRP1-201ENST00000467112 ETDBQ3ZM63 59 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
RRP1-201ENST00000467112 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 OR11H2Q8NH07 326 aa11.36□□□□□ -0.59
RRP1-201ENST00000467112 TMEM219Q86XT9 240 aa11.35□□□□□ -0.59
RRP1-201ENST00000467112 CYSLTR1Q9Y271 337 aa11.35□□□□□ -0.59
RRP1-201ENST00000467112 TRAV12-1A0A0B4J245 112 aa11.35□□□□□ -0.59
RRP1-201ENST00000467112 CENPVL3A0A0U1RRI6 287 aa11.35□□□□□ -0.59
RRP1-201ENST00000467112 F8W1H4 67 aa11.35□□□□□ -0.59
RRP1-201ENST00000467112 MYMXA0A1B0GTQ4 84 aa11.35□□□□□ -0.59
RRP1-201ENST00000467112 S100A4P26447 101 aaKnown RBP11.35□□□□□ -0.59
RRP1-201ENST00000467112 ATP5G2Q06055 141 aa11.35□□□□□ -0.59
RRP1-201ENST00000467112 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
RRP1-201ENST00000467112 ORMDL2Q53FV1 153 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 SAMD13Q5VXD3 122 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 NEXN-AS1Q8NBZ9 246 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 TOMM6Q96B49 74 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 VPS13CQ709C8 3753 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 ZFAND2AQ8N6M9 145 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 GLMPQ8WWB7 406 aa11.34□□□□□ -0.59
RRP1-201ENST00000467112 MGPP08493 103 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 AZU1P20160 251 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 UNQ9165/PRO28630Q6UXU0 137 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 ITLN2Q8WWU7 325 aaPredicted RBP11.33□□□□□ -0.6
RRP1-201ENST00000467112 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 SPTAN1Q13813 2472 aaKnown RBP11.33□□□□□ -0.6
RRP1-201ENST00000467112 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 GPHB5Q86YW7 130 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 RAXQ9Y2V3 346 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 PHLDA3Q9Y5J5 127 aa11.33□□□□□ -0.6
RRP1-201ENST00000467112 LGALS1P09382 135 aaKnown RBP11.32□□□□□ -0.6
RRP1-201ENST00000467112 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
RRP1-201ENST00000467112 BAALCQ8WXS3 180 aa11.32□□□□□ -0.6
RRP1-201ENST00000467112 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
RRP1-201ENST00000467112 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
RRP1-201ENST00000467112 PRADC1Q9BSG0 188 aa11.32□□□□□ -0.6
RRP1-201ENST00000467112 COL12A1Q99715 3063 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 IGHV3OR16-10A0A075B7F0 116 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 PRSS29PA6NIE9 313 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 GAGE13Q4V321 117 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
RRP1-201ENST00000467112 IGKV3-7A0A075B6H7 116 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 TRAV21A0A0B4J279 112 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 F6UB75 175 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 GNRH2O43555 120 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 SIGMAR1Q99720 223 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
RRP1-201ENST00000467112 NPFFO15130 113 aa11.3□□□□□ -0.6
RRP1-201ENST00000467112 ARL3P36405 182 aa11.3□□□□□ -0.6
RRP1-201ENST00000467112 ASIPP42127 132 aa11.3□□□□□ -0.6
RRP1-201ENST00000467112 INSL3P51460 131 aa11.3□□□□□ -0.6
RRP1-201ENST00000467112 SCGB2A2Q13296 93 aa11.3□□□□□ -0.6
RRP1-201ENST00000467112 CD300EQ496F6 205 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms