RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CCDC179H3BU77 68 aa14.04□□□□□ -0.16
SNAPC3-205ENST00000467062 SRSF8Q9BRL6 282 aaKnown RBP14.04□□□□□ -0.16
SNAPC3-205ENST00000467062 LOC107984156A0A0G2JMH3 177 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 A8MWV9 139 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 ARL17AQ8IVW1 177 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 ITPR1Q14643 2758 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 CENPVL3A0A0U1RRI6 287 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 SNCGO76070 127 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 IFITM1P13164 125 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 CRIP1P50238 77 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 ADORA2A-AS1P86434 159 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 TMEM14CQ9P0S9 112 aa14.03□□□□□ -0.16
SNAPC3-205ENST00000467062 A0A087WX48 190 aa14.02□□□□□ -0.17
SNAPC3-205ENST00000467062 MYMXA0A1B0GTQ4 84 aa14.02□□□□□ -0.17
SNAPC3-205ENST00000467062 ASIPP42127 132 aa14.02□□□□□ -0.17
SNAPC3-205ENST00000467062 HES1Q14469 280 aa14.02□□□□□ -0.17
SNAPC3-205ENST00000467062 ANXA2RQ3ZCQ2 193 aa14.02□□□□□ -0.17
SNAPC3-205ENST00000467062 C17orf77Q96MU5 243 aa14.02□□□□□ -0.17
SNAPC3-205ENST00000467062 HIGD1AQ9Y241 93 aa14.02□□□□□ -0.17
SNAPC3-205ENST00000467062 MRPL35Q9NZE8 188 aaKnown RBP14.01□□□□□ -0.17
SNAPC3-205ENST00000467062 SBSPONQ8IVN8 264 aa14.01□□□□□ -0.17
SNAPC3-205ENST00000467062 HIVEP3Q5T1R4 2406 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 LINC01549A6NIU2 74 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 YAE1D1Q9NRH1 226 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 TRBV20-1A0A075B6N2 111 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 LY6LH3BQJ8 138 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 UBE2D3P61077 147 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 UBE2D2P62837 147 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 Q6Q795 121 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 KIR2DL4Q99706 377 aa14□□□□□ -0.17
SNAPC3-205ENST00000467062 I3L2K1 104 aa13.99□□□□□ -0.17
SNAPC3-205ENST00000467062 PLNP26678 52 aa13.99□□□□□ -0.17
SNAPC3-205ENST00000467062 TMSB15BA0A087X1C1 80 aa13.99□□□□□ -0.17
SNAPC3-205ENST00000467062 IGKV1-17P01599 117 aa13.99□□□□□ -0.17
SNAPC3-205ENST00000467062 MYOZ3Q8TDC0 251 aa13.99□□□□□ -0.17
SNAPC3-205ENST00000467062 RASL11BQ9BPW5 248 aa13.99□□□□□ -0.17
SNAPC3-205ENST00000467062 ZFP2Q6ZN57 461 aa13.98□□□□□ -0.17
SNAPC3-205ENST00000467062 IGHV3-23P01764 117 aa13.98□□□□□ -0.17
SNAPC3-205ENST00000467062 PVRIGQ6DKI7 326 aa13.98□□□□□ -0.17
SNAPC3-205ENST00000467062 MSRB2Q9Y3D2 182 aa13.98□□□□□ -0.17
SNAPC3-205ENST00000467062 J3KRW8 73 aa13.97□□□□□ -0.17
SNAPC3-205ENST00000467062 DYNAPQ8N1N2 210 aa13.97□□□□□ -0.17
SNAPC3-205ENST00000467062 A0A1W2PPR1 153 aa13.97□□□□□ -0.17
SNAPC3-205ENST00000467062 ANKRD29Q8N6D5 301 aa13.97□□□□□ -0.17
SNAPC3-205ENST00000467062 DPM3Q9P2X0 92 aa13.97□□□□□ -0.17
SNAPC3-205ENST00000467062 K7EIM0 57 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 IGHG4P01861 327 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 PRTN3P24158 256 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 RAB1BQ9H0U4 201 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 H3BVH4 76 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 TNFRSF6BO95407 300 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 LYPD1Q8N2G4 141 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 AJUBAQ96IF1 538 aa13.96□□□□□ -0.17
SNAPC3-205ENST00000467062 UBE2D1P51668 147 aa13.95□□□□□ -0.18
SNAPC3-205ENST00000467062 IGHV3OR16-8A0A075B7F1 116 aa13.95□□□□□ -0.18
SNAPC3-205ENST00000467062 LINC01548A6NM66 108 aa13.95□□□□□ -0.18
SNAPC3-205ENST00000467062 LY6G5BQ8NDX9 201 aa13.95□□□□□ -0.18
SNAPC3-205ENST00000467062 C8orf49Q96NF6 230 aa13.95□□□□□ -0.18
SNAPC3-205ENST00000467062 TRBV19A0A075B6N1 114 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 NBR2O15453 112 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 SH2D1AO60880 128 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 NDUFA3O95167 84 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 SCGB1C2P0DMR2 95 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 LY6DQ14210 128 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 SFTA2Q6UW10 78 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 Q8N8P6 123 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 TRAV4A0A0B4J268 109 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 IGHV3-35A0A0C4DH35 117 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 TCL1BO95988 128 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 FBXL19-AS1Q494R0 122 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 FAM159AQ6UWV7 190 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 CFHR4Q92496 578 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 RNF185Q96GF1 192 aa13.94□□□□□ -0.18
SNAPC3-205ENST00000467062 ZFP36P26651 326 aaKnown RBP13.93□□□□□ -0.18
SNAPC3-205ENST00000467062 KLRB1Q12918 225 aa13.93□□□□□ -0.18
SNAPC3-205ENST00000467062 TIMD4Q96H15 378 aa13.93□□□□□ -0.18
SNAPC3-205ENST00000467062 CSMD2Q7Z408 3487 aa13.93□□□□□ -0.18
SNAPC3-205ENST00000467062 TRAV8-2A0A0B4J237 113 aa13.93□□□□□ -0.18
SNAPC3-205ENST00000467062 NDPQ00604 133 aa13.93□□□□□ -0.18
SNAPC3-205ENST00000467062 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
SNAPC3-205ENST00000467062 M0R3E3 92 aa13.92□□□□□ -0.18
SNAPC3-205ENST00000467062 LGALS1P09382 135 aaKnown RBP13.92□□□□□ -0.18
SNAPC3-205ENST00000467062 TMEM126AQ9H061 195 aa13.92□□□□□ -0.18
SNAPC3-205ENST00000467062 SPG11Q96JI7 2443 aa13.92□□□□□ -0.18
SNAPC3-205ENST00000467062 M0QXV9 152 aa13.92□□□□□ -0.18
SNAPC3-205ENST00000467062 MEIG1Q5JSS6 88 aa13.92□□□□□ -0.18
SNAPC3-205ENST00000467062 SIGLEC15Q6ZMC9 328 aa13.92□□□□□ -0.18
SNAPC3-205ENST00000467062 TMEM78Q5T7P6 136 aa13.91□□□□□ -0.18
SNAPC3-205ENST00000467062 OR11H6Q8NGC7 330 aa13.91□□□□□ -0.18
SNAPC3-205ENST00000467062 H7C1H1 209 aa13.91□□□□□ -0.18
SNAPC3-205ENST00000467062 SRSF9Q13242 221 aaKnown RBP eCLIP13.91□□□□□ -0.183e-6■□□□□ 11.3
SNAPC3-205ENST00000467062 ZNF491Q8N8L2 437 aa13.91□□□□□ -0.18
SNAPC3-205ENST00000467062 ID1P41134 155 aa13.9□□□□□ -0.18
SNAPC3-205ENST00000467062 VMO1Q7Z5L0 202 aa13.9□□□□□ -0.18
SNAPC3-205ENST00000467062 OR10J6PQ8NGY7 276 aa13.9□□□□□ -0.18
SNAPC3-205ENST00000467062 CELSR2Q9HCU4 2923 aa13.9□□□□□ -0.18
SNAPC3-205ENST00000467062 F8VRH5 84 aa13.89□□□□□ -0.19
SNAPC3-205ENST00000467062 C11orf71Q6IPW1 123 aa13.89□□□□□ -0.19
SNAPC3-205ENST00000467062 RNF125Q96EQ8 232 aa13.89□□□□□ -0.19
SNAPC3-205ENST00000467062 AAMDCQ9H7C9 122 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms