RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 SNURFLB1AK76 121 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 PRAC2D3DTV9 90 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 PAX4O43316 350 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 PFN1P07737 140 aaKnown RBP5□□□□□ -1.61
CLDN4-204ENST00000466411 GIG44P09565 113 aaPredicted RBP5□□□□□ -1.61
CLDN4-204ENST00000466411 SPART-AS1P0CW21 52 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 TMEM183BQ1AE95 376 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 TDRG1Q3Y452 100 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 ANXA2RQ3ZCQ2 193 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 IBA57Q5T440 356 aaKnown RBP5□□□□□ -1.61
CLDN4-204ENST00000466411 COX8CQ7Z4L0 72 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 Q86TA4 180 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 EIF4E3Q8N5X7 224 aaKnown RBP5□□□□□ -1.61
CLDN4-204ENST00000466411 C11orf52Q96A22 123 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 VGLL1Q99990 258 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 PSG8Q9UQ74 426 aa5□□□□□ -1.61
CLDN4-204ENST00000466411 IGHV3OR16-12A0A075B7B8 117 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 IGHV1OR15-1A0A075B7D0 117 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 TRAV12-3A0A0B4J271 114 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 LOC102723971A0A1B0GUV8 181 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 NUPR2A6NF83 97 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 RBFOX3A6NFN3 312 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 CRXO43186 299 aaPredicted RBP4.99□□□□□ -1.61
CLDN4-204ENST00000466411 LTAP01374 205 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 RNASE4P34096 147 aaKnown RBP4.99□□□□□ -1.61
CLDN4-204ENST00000466411 TCTAP57738 103 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 ZNF415Q09FC8 603 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 FAM162BQ5T6X4 162 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 ZFAND2AQ8N6M9 145 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 Q8NAQ8 132 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 C11orf45Q8TAV5 145 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 SPXQ9BT56 116 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 EIF5A2Q9GZV4 153 aaKnown RBP4.99□□□□□ -1.61
CLDN4-204ENST00000466411 SDF2L1Q9HCN8 221 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 TP53TG3Q9ULZ0 132 aa4.99□□□□□ -1.61
CLDN4-204ENST00000466411 TIMM8BQ9Y5J9 83 aaPredicted RBP4.99□□□□□ -1.61
CLDN4-204ENST00000466411 APOBP04114 4563 aaKnown RBP4.98□□□□□ -1.61
CLDN4-204ENST00000466411 TRAV12-2A0A075B6T6 113 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 IGHV4-28A0A0C4DH34 117 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 A0A0J9YWU9 116 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 A0A1B0GV50 99 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 XKRY2A2RUG3 117 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 CXorf65A6NEN9 183 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 C9orf118A6NHY6 69 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 CBY3A6NI87 242 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 FABP5P3A8MUU1 101 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 C9JCJ5 164 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 ZNF324O75467 553 aaPredicted RBP4.98□□□□□ -1.61
CLDN4-204ENST00000466411 GCGP01275 180 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 ATP5G3P48201 142 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 GNG4P50150 75 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 FXYD7P58549 80 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 DEFB1P60022 68 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 GNG5P63218 68 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 CCL20P78556 96 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 DAZ2Q13117 558 aaKnown RBP4.98□□□□□ -1.61
CLDN4-204ENST00000466411 ERCC8Q13216 396 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 LGALS9BQ3B8N2 356 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 FAM74A3Q4VXF1 159 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 ZNF506Q5JVG8 444 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 PRNTQ86SH4 94 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 TMEM183AQ8IXX5 376 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 C1orf158Q8N1D5 194 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 Q8TAT8 98 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 FAM210BQ96KR6 192 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 FAM210AQ96ND0 272 aa4.98□□□□□ -1.61
CLDN4-204ENST00000466411 KLK5Q9Y337 293 aaPredicted RBP4.98□□□□□ -1.61
CLDN4-204ENST00000466411 LRP1BQ9NZR2 4599 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 TRAV8-1A0A0A6YYK1 113 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 CIDEAO60543 219 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 EIF3GO75821 320 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLDN4-204ENST00000466411 IGLV2-11P01706 119 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 CXCL1P09341 107 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 RPL35P42766 123 aaKnown RBP4.97□□□□□ -1.61
CLDN4-204ENST00000466411 BTN1A1Q13410 526 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 PEA15Q15121 130 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 PIK3CD-AS1Q5SR53 167 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 BAGE2Q86Y30 109 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 RNASE8Q8TDE3 154 aaKnown RBP4.97□□□□□ -1.61
CLDN4-204ENST00000466411 RETNQ9HD89 108 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 MED9Q9NWA0 146 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 LY96Q9Y6Y9 160 aa4.97□□□□□ -1.61
CLDN4-204ENST00000466411 SRRM2Q9UQ35 2752 aaKnown RBP4.97□□□□□ -1.61
CLDN4-204ENST00000466411 TRAV10A0A0B4J240 114 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 RAB19A4D1S5 217 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 J3KRW8 73 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 HTN1P15515 57 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 TCL1AP56279 114 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 DAD1P61803 113 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 ZNF674Q2M3X9 581 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 LGALS9CQ6DKI2 356 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 DAZAP1Q96EP5 407 aaKnown RBP4.96□□□□□ -1.62
CLDN4-204ENST00000466411 C18orf15Q96N68 181 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 DKK2Q9UBU2 259 aa4.96□□□□□ -1.62
CLDN4-204ENST00000466411 ATP5G1P05496 136 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 S100A4P26447 101 aaKnown RBP4.95□□□□□ -1.62
CLDN4-204ENST00000466411 ASIPP42127 132 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 RPS20P60866 119 aaKnown RBP4.95□□□□□ -1.62
CLDN4-204ENST00000466411 SLAQ13239 276 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms