RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 FAM159AQ6UWV7 190 aa13.84□□□□□ -0.19
COL6A1-203ENST00000466285 NFE4Q86UQ8 179 aa13.84□□□□□ -0.19
COL6A1-203ENST00000466285 TRGV11A0A075B6L2 103 aa13.83□□□□□ -0.2
COL6A1-203ENST00000466285 CRYGDP07320 174 aa13.83□□□□□ -0.2
COL6A1-203ENST00000466285 GIPP09681 153 aaPredicted RBP13.83□□□□□ -0.2
COL6A1-203ENST00000466285 TDRG1Q3Y452 100 aa13.83□□□□□ -0.2
COL6A1-203ENST00000466285 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.2
COL6A1-203ENST00000466285 PCNPQ8WW12 178 aaKnown RBP13.83□□□□□ -0.2
COL6A1-203ENST00000466285 C17orf112F2Z3M2 114 aa13.82□□□□□ -0.2
COL6A1-203ENST00000466285 HMGB3O15347 200 aaKnown RBP13.82□□□□□ -0.2
COL6A1-203ENST00000466285 RAB2AP61019 212 aa13.82□□□□□ -0.2
COL6A1-203ENST00000466285 KHDC3LQ587J8 217 aa13.82□□□□□ -0.2
COL6A1-203ENST00000466285 DPPA3Q6W0C5 159 aa13.82□□□□□ -0.2
COL6A1-203ENST00000466285 SGK494Q96LW2 274 aa13.82□□□□□ -0.2
COL6A1-203ENST00000466285 SPXQ9BT56 116 aa13.82□□□□□ -0.2
COL6A1-203ENST00000466285 C11orf21Q9P2W6 132 aa13.82□□□□□ -0.2
COL6A1-203ENST00000466285 LRCOL1A6NCL2 159 aa13.81□□□□□ -0.2
COL6A1-203ENST00000466285 PGPA6NDG6 321 aa13.81□□□□□ -0.2
COL6A1-203ENST00000466285 G3V3Q6 166 aa13.81□□□□□ -0.2
COL6A1-203ENST00000466285 GATA1P15976 413 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-203ENST00000466285 Q8N3U1 123 aa13.81□□□□□ -0.2
COL6A1-203ENST00000466285 OR4C5Q8NGB2 326 aa13.81□□□□□ -0.2
COL6A1-203ENST00000466285 OTORQ9NRC9 128 aa13.81□□□□□ -0.2
COL6A1-203ENST00000466285 LENEPQ9Y5L5 61 aa13.81□□□□□ -0.2
COL6A1-203ENST00000466285 C9JCJ5 164 aa13.8□□□□□ -0.2
COL6A1-203ENST00000466285 MPC2O95563 127 aa13.8□□□□□ -0.2
COL6A1-203ENST00000466285 ORM1P02763 201 aa13.8□□□□□ -0.2
COL6A1-203ENST00000466285 EVI2AP22794 236 aa13.8□□□□□ -0.2
COL6A1-203ENST00000466285 ZNF80P51504 273 aaPredicted RBP13.8□□□□□ -0.2
COL6A1-203ENST00000466285 TMEM75Q8N9X5 138 aa13.8□□□□□ -0.2
COL6A1-203ENST00000466285 MBD2Q9UBB5 411 aa13.8□□□□□ -0.2
COL6A1-203ENST00000466285 M0R2P5 195 aa13.79□□□□□ -0.2
COL6A1-203ENST00000466285 GCSHP23434 173 aa13.79□□□□□ -0.2
COL6A1-203ENST00000466285 NHLRC2Q8NBF2 726 aa13.79□□□□□ -0.2
COL6A1-203ENST00000466285 TMED6Q8WW62 240 aa13.79□□□□□ -0.2
COL6A1-203ENST00000466285 TRAV9-2A0A087WT02 112 aa13.78□□□□□ -0.2
COL6A1-203ENST00000466285 WFDC2Q14508 124 aa13.78□□□□□ -0.2
COL6A1-203ENST00000466285 FRZBQ92765 325 aa13.78□□□□□ -0.2
COL6A1-203ENST00000466285 TXNDC17Q9BRA2 123 aa13.78□□□□□ -0.2
COL6A1-203ENST00000466285 IGHV3-73A0A0B4J1V6 119 aa13.77□□□□□ -0.21
COL6A1-203ENST00000466285 IFNA5P01569 189 aa13.77□□□□□ -0.21
COL6A1-203ENST00000466285 RPL12P30050 165 aaKnown RBP13.77□□□□□ -0.21
COL6A1-203ENST00000466285 SLC25A29Q8N8R3 303 aa13.77□□□□□ -0.21
COL6A1-203ENST00000466285 Q9HAA7 133 aa13.77□□□□□ -0.21
COL6A1-203ENST00000466285 FAM30AQ9NZY2 134 aa13.77□□□□□ -0.21
COL6A1-203ENST00000466285 TRAV21A0A0B4J279 112 aa13.76□□□□□ -0.21
COL6A1-203ENST00000466285 TAS2R45P59539 299 aa13.76□□□□□ -0.21
COL6A1-203ENST00000466285 Q5BKY6 102 aa13.76□□□□□ -0.21
COL6A1-203ENST00000466285 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
COL6A1-203ENST00000466285 IGLV5-52A0A0A0MRZ9 124 aa13.75□□□□□ -0.21
COL6A1-203ENST00000466285 IGHV3-38A0A0C4DH36 116 aa13.75□□□□□ -0.21
COL6A1-203ENST00000466285 A0A1B0GVG6 124 aa13.75□□□□□ -0.21
COL6A1-203ENST00000466285 PET100P0DJ07 73 aa13.75□□□□□ -0.21
COL6A1-203ENST00000466285 PPT1P50897 306 aa13.75□□□□□ -0.21
COL6A1-203ENST00000466285 CMTM2Q8TAZ6 248 aa13.75□□□□□ -0.21
COL6A1-203ENST00000466285 IGHV3-30P01768 117 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 IGHV3-33P01772 117 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 ARL14EPLP0DKL9 152 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 IGHV3-30-3P0DP02 117 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 IGHV3-30-5P0DP03 117 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 LINC01556Q5JQF7 62 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 CFAP126Q5VTH2 177 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 SCGB1C1Q8TD33 95 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
COL6A1-203ENST00000466285 FBLL1A6NHQ2 334 aaKnown RBP13.73□□□□□ -0.21
COL6A1-203ENST00000466285 TIRAPP58753 221 aa13.73□□□□□ -0.21
COL6A1-203ENST00000466285 OR2T35Q8NGX2 323 aa13.73□□□□□ -0.21
COL6A1-203ENST00000466285 IBA57-AS1B1ANH7 110 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 K7EP13 123 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 RS1O15537 224 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 IGLV2-11P01706 119 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 Q6ZSN1 163 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 C10orf126Q8N4M7 172 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 Q8N814 137 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 C9orf85Q96MD7 179 aa13.72□□□□□ -0.21
COL6A1-203ENST00000466285 PGPEP1LA6NFU8 196 aa13.71□□□□□ -0.21
COL6A1-203ENST00000466285 ACOT6Q3I5F7 207 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-203ENST00000466285 ZNF876PQ49A33 203 aa13.71□□□□□ -0.21
COL6A1-203ENST00000466285 ZNF506Q5JVG8 444 aa13.71□□□□□ -0.21
COL6A1-203ENST00000466285 PQLC2Q6ZP29 291 aa13.71□□□□□ -0.21
COL6A1-203ENST00000466285 Q9UF83 564 aa13.71□□□□□ -0.21
COL6A1-203ENST00000466285 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
COL6A1-203ENST00000466285 PSCAO43653 123 aa13.7□□□□□ -0.22
COL6A1-203ENST00000466285 RNASE3P12724 160 aaKnown RBP13.7□□□□□ -0.22
COL6A1-203ENST00000466285 OR10J3Q5JRS4 329 aa13.7□□□□□ -0.22
COL6A1-203ENST00000466285 OR10G9Q8NGN4 311 aa13.7□□□□□ -0.22
COL6A1-203ENST00000466285 OR10G7Q8NGN6 311 aa13.7□□□□□ -0.22
COL6A1-203ENST00000466285 GCGP01275 180 aa13.69□□□□□ -0.22
COL6A1-203ENST00000466285 TCRAP04437 139 aa13.69□□□□□ -0.22
COL6A1-203ENST00000466285 TCTE3Q8IZS6 198 aa13.69□□□□□ -0.22
COL6A1-203ENST00000466285 AQP10Q96PS8 301 aa13.69□□□□□ -0.22
COL6A1-203ENST00000466285 A0A1W2PPV4 95 aa13.68□□□□□ -0.22
COL6A1-203ENST00000466285 STAG3L2P0CL84 134 aa13.68□□□□□ -0.22
COL6A1-203ENST00000466285 STAG3L3P0CL85 134 aa13.68□□□□□ -0.22
COL6A1-203ENST00000466285 CDC34P49427 236 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-203ENST00000466285 FAM74A1Q5RGS3 127 aa13.68□□□□□ -0.22
COL6A1-203ENST00000466285 KCNS1Q96KK3 526 aa13.68□□□□□ -0.22
COL6A1-203ENST00000466285 TMEM70Q9BUB7 260 aa13.68□□□□□ -0.22
COL6A1-203ENST00000466285 TNFSF18Q9UNG2 199 aa13.68□□□□□ -0.22
COL6A1-203ENST00000466285 hCG_2014768A0A024R1R8 64 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms