RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MAP6D1Q9H9H5 199 aa4.04□□□□□ -1.76
VPS41-211ENST00000466017 RPS10P5Q9NQ39 176 aa4.04□□□□□ -1.76
VPS41-211ENST00000466017 V9GYV3 84 aa4.04□□□□□ -1.76
VPS41-211ENST00000466017 HLA-DRB4X5D2U9 266 aa4.04□□□□□ -1.76
VPS41-211ENST00000466017 SORL1Q92673 2214 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 TRBV24-1A0A075B6N3 115 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 IGKV2-40A0A087WW87 121 aaPredicted RBP4.03□□□□□ -1.76
VPS41-211ENST00000466017 TRAV21A0A0B4J279 112 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 SMIM27A0A1W2PRY6 76 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 IZUMO1RA6ND01 250 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 PGPEP1LA6NFU8 196 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 H7BYZ3 331 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 GATCO43716 136 aaKnown RBP4.03□□□□□ -1.76
VPS41-211ENST00000466017 IGKV2D-40P01614 121 aaPredicted RBP4.03□□□□□ -1.76
VPS41-211ENST00000466017 LEPP41159 167 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 TFPI2P48307 235 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 RIPPLY3P57055 190 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 ERVFC1-1P60608 527 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 RPL19P84098 196 aaKnown RBP4.03□□□□□ -1.76
VPS41-211ENST00000466017 ERCC8Q13216 396 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 ODF3L2Q3SX64 289 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 FAM162BQ5T6X4 162 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 WDR73Q6P4I2 378 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 AMTNQ6UX39 209 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 LINC00322Q6ZN03 302 aaPredicted RBP4.03□□□□□ -1.76
VPS41-211ENST00000466017 LURAP1LQ8IV03 231 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
VPS41-211ENST00000466017 TSKUQ8WUA8 353 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 ZC2HC1AQ96GY0 325 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 SGK494Q96LW2 274 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 LINC00467Q9BRT7 94 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 TM2D2Q9BX73 214 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 IL36BQ9NZH7 164 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 TP53TG3Q9ULZ0 132 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 RPH3ALQ9UNE2 315 aa4.03□□□□□ -1.76
VPS41-211ENST00000466017 SETXQ7Z333 2677 aaKnown RBP4.02□□□□□ -1.77
VPS41-211ENST00000466017 NF1P21359 2839 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 WNK1Q9H4A3 2382 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 XKRY2A2RUG3 117 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 A8MZ25 164 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 OR11H12B2RN74 326 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 ZNF324O75467 553 aaPredicted RBP4.02□□□□□ -1.77
VPS41-211ENST00000466017 P01737 135 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 MGST1P10620 155 aaKnown RBP4.02□□□□□ -1.77
VPS41-211ENST00000466017 CDKN1BP46527 198 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 NUTF2P61970 127 aaKnown RBP4.02□□□□□ -1.77
VPS41-211ENST00000466017 EGFEM1PQ0D2K5 195 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 OR5I1Q13606 314 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 ELOBQ15370 118 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 TDRG1Q3Y452 100 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 COX19Q49B96 90 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 MORN3Q6PF18 240 aaPredicted RBP4.02□□□□□ -1.77
VPS41-211ENST00000466017 RASL11AQ6T310 242 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 TRPT1Q86TN4 253 aaKnown RBP4.02□□□□□ -1.77
VPS41-211ENST00000466017 NRACQ8N912 160 aa4.02□□□□□ -1.77
VPS41-211ENST00000466017 RPP21Q9H633 154 aaKnown RBP4.02□□□□□ -1.77
VPS41-211ENST00000466017 JMJD1CQ15652 2540 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 IGKV3D-20A0A0C4DH25 116 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 A0A1W2PPQ1 181 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 TMEM189A5PLL7 270 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 COLCA2A8K830 154 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 ZNF705GA8MUZ8 300 aaPredicted RBP4.01□□□□□ -1.77
VPS41-211ENST00000466017 F2Z2F3 143 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 F6UB75 175 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 CRXO43186 299 aaPredicted RBP4.01□□□□□ -1.77
VPS41-211ENST00000466017 SH2D1AO60880 128 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 TYMSP04818 313 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 GPX1P07203 203 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 ZNF705DP0CH99 300 aaPredicted RBP4.01□□□□□ -1.77
VPS41-211ENST00000466017 ZNF705BP0CI00 300 aaPredicted RBP4.01□□□□□ -1.77
VPS41-211ENST00000466017 IGLL1P15814 213 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 S100PP25815 95 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 ZNF80P51504 273 aaPredicted RBP4.01□□□□□ -1.77
VPS41-211ENST00000466017 GDF5OSQ5U4N7 250 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 KCNIP4Q6PIL6 250 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 SPATA3Q8NHX4 192 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 PTH2Q96A98 100 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 KCNS1Q96KK3 526 aa4.01□□□□□ -1.77
VPS41-211ENST00000466017 RNASE7Q9H1E1 156 aaKnown RBP4.01□□□□□ -1.77
VPS41-211ENST00000466017 IGHV4-4A0A075B6R2 117 aa4□□□□□ -1.77
VPS41-211ENST00000466017 KIR2DL5BA0A0G2JN68 375 aa4□□□□□ -1.77
VPS41-211ENST00000466017 KIR2DL5BA0A0G2JPC4 375 aa4□□□□□ -1.77
VPS41-211ENST00000466017 A0A1B0GW15 77 aa4□□□□□ -1.77
VPS41-211ENST00000466017 C7orf71A4D174 169 aa4□□□□□ -1.77
VPS41-211ENST00000466017 KNCNA6PVL3 124 aa4□□□□□ -1.77
VPS41-211ENST00000466017 SNAI2O43623 268 aa4□□□□□ -1.77
VPS41-211ENST00000466017 CD7P09564 240 aa4□□□□□ -1.77
VPS41-211ENST00000466017 OR5AL1P0C617 328 aa4□□□□□ -1.77
VPS41-211ENST00000466017 IGLC6P0CF74 106 aa4□□□□□ -1.77
VPS41-211ENST00000466017 DEFB1P60022 68 aa4□□□□□ -1.77
VPS41-211ENST00000466017 BTN1A1Q13410 526 aa4□□□□□ -1.77
VPS41-211ENST00000466017 ANXA2RQ3ZCQ2 193 aa4□□□□□ -1.77
VPS41-211ENST00000466017 ACTL10Q5JWF8 245 aa4□□□□□ -1.77
VPS41-211ENST00000466017 ATP5L2Q7Z4Y8 100 aa4□□□□□ -1.77
VPS41-211ENST00000466017 GTSCR1Q86UQ5 136 aa4□□□□□ -1.77
VPS41-211ENST00000466017 STHQ8IWL8 128 aa4□□□□□ -1.77
VPS41-211ENST00000466017 KIR2DL5AQ8N109 375 aa4□□□□□ -1.77
VPS41-211ENST00000466017 TMEM256Q8N2U0 113 aa4□□□□□ -1.77
VPS41-211ENST00000466017 GATD1Q8NB37 220 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms