RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 ERVFC1-1P60608 527 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 HIST1H1AQ02539 215 aaPredicted RBP6.49□□□□□ -1.37
UBA3-208ENST00000465627 KIR3DS1Q14943 382 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 ZNF124Q15973 351 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 SMUG1Q53HV7 270 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 Q6ZQT7 251 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 OR4B1Q8NGF8 309 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 IL36BQ9NZH7 164 aa6.49□□□□□ -1.37
UBA3-208ENST00000465627 CA1P00915 261 aaPredicted RBP6.48□□□□□ -1.37
UBA3-208ENST00000465627 CXCL1P09341 107 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 FOXA3P55318 350 aaPredicted RBP6.48□□□□□ -1.37
UBA3-208ENST00000465627 FAM162BQ5T6X4 162 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 C9orf66Q5T8R8 295 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 Q6AWC8 147 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 PRR27Q6MZM9 219 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 C15orf54Q8N8G6 183 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 MRAPQ8TCY5 172 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 GTSF1Q8WW33 167 aa6.48□□□□□ -1.37
UBA3-208ENST00000465627 RPP21Q9H633 154 aaKnown RBP6.48□□□□□ -1.37
UBA3-208ENST00000465627 TRAV9-1A0A075B6T8 112 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 IGKV3D-20A0A0C4DH25 116 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 FAM231BA6NCW3 169 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 KNCNA6PVL3 124 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 FABP5P3A8MUU1 101 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 CRXO43186 299 aaPredicted RBP6.47□□□□□ -1.37
UBA3-208ENST00000465627 GATCO43716 136 aaKnown RBP6.47□□□□□ -1.37
UBA3-208ENST00000465627 ZNF324O75467 553 aaPredicted RBP6.47□□□□□ -1.37
UBA3-208ENST00000465627 DUSP14O95147 198 aaKnown RBP6.47□□□□□ -1.37
UBA3-208ENST00000465627 P01737 135 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 CD7P09564 240 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 TRPT1Q86TN4 253 aaKnown RBP6.47□□□□□ -1.37
UBA3-208ENST00000465627 TSKUQ8WUA8 353 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 DNAH7Q8WXX0 4024 aa6.47□□□□□ -1.37
UBA3-208ENST00000465627 TGIF2-C20orf24A0A0A6YYL0 155 aa6.46□□□□□ -1.37
UBA3-208ENST00000465627 ZNF705GA8MUZ8 300 aaPredicted RBP6.46□□□□□ -1.37
UBA3-208ENST00000465627 TYMSP04818 313 aa6.46□□□□□ -1.37
UBA3-208ENST00000465627 IGLC6P0CF74 106 aa6.46□□□□□ -1.37
UBA3-208ENST00000465627 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.37
UBA3-208ENST00000465627 RPL19P84098 196 aaKnown RBP6.46□□□□□ -1.37
UBA3-208ENST00000465627 EBLN2Q6P2I7 272 aa6.46□□□□□ -1.37
UBA3-208ENST00000465627 MCRIP2Q9BUT9 160 aaKnown RBP6.46□□□□□ -1.37
UBA3-208ENST00000465627 GFRA4Q9GZZ7 299 aa6.46□□□□□ -1.37
UBA3-208ENST00000465627 HECTD4Q9Y4D8 3996 aa6.46□□□□□ -1.37
UBA3-208ENST00000465627 URGCP-MRPS24S4R325 110 aa6.46□□□□□ -1.37
UBA3-208ENST00000465627 OR11H12B2RN74 326 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 PHOX2AO14813 284 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 GIG44P09565 113 aaPredicted RBP6.45□□□□□ -1.38
UBA3-208ENST00000465627 FRMD6-AS1P0C7T7 363 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 RBMY1A1P0DJD3 496 aaKnown RBP6.45□□□□□ -1.38
UBA3-208ENST00000465627 RBMY1CP0DJD4 496 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 IGLL1P15814 213 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 CMC4P56277 68 aaPredicted RBP6.45□□□□□ -1.38
UBA3-208ENST00000465627 RBMY1FQ15415 496 aaKnown RBP6.45□□□□□ -1.38
UBA3-208ENST00000465627 ACTL10Q5JWF8 245 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 DNLZQ5SXM8 178 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 GFI1BQ5VTD9 330 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 Q8N1Y9 231 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 NUP35Q8NFH5 326 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 OR2D3Q8NGH3 330 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 NEU1Q99519 415 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 HERC1Q15751 4861 aa6.45□□□□□ -1.38
UBA3-208ENST00000465627 TRAV21A0A0B4J279 112 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 A0A1B0GXF2 115 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 A8MWL6 223 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 G3V4G9 280 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 M0R2Z0 102 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 GZMBP10144 247 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 RAB5AP20339 215 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 CTRLP40313 264 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 LEPP41159 167 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 CDKN1BP46527 198 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 EGFEM1PQ0D2K5 195 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 TDRG1Q3Y452 100 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 DAZAP1Q96EP5 407 aaKnown RBP6.44□□□□□ -1.38
UBA3-208ENST00000465627 CNFNQ9BYD5 112 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 WFDC10AQ9H1F0 79 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 LCE6AA0A183 80 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 C7orf71A4D174 169 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 TMEM189A5PLL7 270 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 HIGD1CA8MV81 97 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 IGKV3-20P01619 116 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 GPX1P07203 203 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 RNASE4P34096 147 aaKnown RBP6.44□□□□□ -1.38
UBA3-208ENST00000465627 SPINK13Q1W4C9 94 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 KCNIP4Q6PIL6 250 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 GATD1Q8NB37 220 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 BTF3L4Q96K17 158 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 FAM210BQ96KR6 192 aa6.44□□□□□ -1.38
UBA3-208ENST00000465627 TRAV12-2A0A075B6T6 113 aa6.43□□□□□ -1.38
UBA3-208ENST00000465627 A0A1W2PPQ1 181 aa6.43□□□□□ -1.38
UBA3-208ENST00000465627 SNAI2O43623 268 aa6.43□□□□□ -1.38
UBA3-208ENST00000465627 S100PP25815 95 aa6.43□□□□□ -1.38
UBA3-208ENST00000465627 TSPOP30536 169 aa6.43□□□□□ -1.38
UBA3-208ENST00000465627 TCL1AP56279 114 aa6.43□□□□□ -1.38
UBA3-208ENST00000465627 RPS20P60866 119 aaKnown RBP6.43□□□□□ -1.38
UBA3-208ENST00000465627 ANXA2RQ3ZCQ2 193 aa6.43□□□□□ -1.38
UBA3-208ENST00000465627 LINC00467Q9BRT7 94 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 309 ms