RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 IBA57Q5T440 356 aaKnown RBP8.22□□□□□ -1.09
CUX1-207ENST00000465461 TMEM88Q6PEY1 159 aa8.22□□□□□ -1.09
CUX1-207ENST00000465461 LINC00612Q8N6U2 182 aa8.22□□□□□ -1.09
CUX1-207ENST00000465461 LINC00476Q8WZB0 136 aa8.22□□□□□ -1.09
CUX1-207ENST00000465461 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
CUX1-207ENST00000465461 FMC1Q96HJ9 113 aa8.22□□□□□ -1.09
CUX1-207ENST00000465461 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 IGHV3-16A0A0C4DH30 117 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 FBLL1A6NHQ2 334 aaKnown RBP8.21□□□□□ -1.1
CUX1-207ENST00000465461 TEX46H3BTG2 121 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 IGHV3-53P01767 116 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 ATP5G1P05496 136 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 PFN1P07737 140 aaKnown RBP8.21□□□□□ -1.1
CUX1-207ENST00000465461 HOXA5P20719 270 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 DERL1Q9BUN8 251 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 SDF2L1Q9HCN8 221 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 MANBALQ9NQG1 85 aa8.21□□□□□ -1.1
CUX1-207ENST00000465461 TRGV2A0A075B6R0 118 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 IGKV3D-20A0A0C4DH25 116 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 LTAP01374 205 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 OR5I1Q13606 314 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 TDRG1Q3Y452 100 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 PCNPQ8WW12 178 aaKnown RBP8.2□□□□□ -1.1
CUX1-207ENST00000465461 TCEAL7Q9BRU2 100 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 NDUFAF3Q9BU61 184 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 ZFP30Q9Y2G7 519 aa8.2□□□□□ -1.1
CUX1-207ENST00000465461 A0A0J9YY99 117 aa8.19□□□□□ -1.1
CUX1-207ENST00000465461 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
CUX1-207ENST00000465461 RAB19A4D1S5 217 aa8.19□□□□□ -1.1
CUX1-207ENST00000465461 FABP5P3A8MUU1 101 aa8.19□□□□□ -1.1
CUX1-207ENST00000465461 M0R036 132 aa8.19□□□□□ -1.1
CUX1-207ENST00000465461 SH2D1AO60880 128 aa8.19□□□□□ -1.1
CUX1-207ENST00000465461 BCL2P10415 239 aa8.19□□□□□ -1.1
CUX1-207ENST00000465461 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
CUX1-207ENST00000465461 TMSB15BA0A087X1C1 80 aa8.18□□□□□ -1.1
CUX1-207ENST00000465461 GRIFINA4D1Z8 144 aa8.18□□□□□ -1.1
CUX1-207ENST00000465461 IFNA1P01562 189 aa8.18□□□□□ -1.1
CUX1-207ENST00000465461 ORM1P02763 201 aa8.18□□□□□ -1.1
CUX1-207ENST00000465461 RPL35P42766 123 aaKnown RBP8.18□□□□□ -1.1
CUX1-207ENST00000465461 BLOC1S1P78537 153 aa8.18□□□□□ -1.1
CUX1-207ENST00000465461 MEF2BQ02080 365 aaPredicted RBP8.18□□□□□ -1.1
CUX1-207ENST00000465461 BAGE2Q86Y30 109 aa8.18□□□□□ -1.1
CUX1-207ENST00000465461 KCNS1Q96KK3 526 aa8.18□□□□□ -1.1
CUX1-207ENST00000465461 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
CUX1-207ENST00000465461 TRAV26-1A0A087WT03 109 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 C9JCJ5 164 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 NUDT3O95989 172 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 SFTA3P0C7M3 94 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 TCTAP57738 103 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 LGALS9BQ3B8N2 356 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 FAM162BQ5T6X4 162 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 COX8CQ7Z4L0 72 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 ZNF575Q86XF7 245 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 SPXQ9BT56 116 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 MED9Q9NWA0 146 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 VAX2Q9UIW0 290 aa8.17□□□□□ -1.1
CUX1-207ENST00000465461 PGPEP1LA6NFU8 196 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 B4DEV8 164 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 KRBOX1C9JBD0 128 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 M0R2P5 195 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 S100A9P06702 114 aaKnown RBP8.16□□□□□ -1.1
CUX1-207ENST00000465461 RNASE3P12724 160 aaKnown RBP8.16□□□□□ -1.1
CUX1-207ENST00000465461 CENPWQ5EE01 88 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 LGALS9CQ6DKI2 356 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 PRR27Q6MZM9 219 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 POM121L12Q8N7R1 296 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 LYPD6BQ8NI32 183 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 ZNF479Q96JC4 524 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 MLST8Q9BVC4 326 aa8.16□□□□□ -1.1
CUX1-207ENST00000465461 RBFOX3A6NFN3 312 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 PDE6DO43924 150 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 RPL19P84098 196 aaKnown RBP8.15□□□□□ -1.1
CUX1-207ENST00000465461 TEX261Q6UWH6 196 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 RASL10AQ92737 203 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 FAM210BQ96KR6 192 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 C9orf85Q96MD7 179 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 TXNDC17Q9BRA2 123 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 RYR3Q15413 4870 aa8.15□□□□□ -1.1
CUX1-207ENST00000465461 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.11
CUX1-207ENST00000465461 MUC4Q99102 2169 aa8.14□□□□□ -1.11
CUX1-207ENST00000465461 H3BVH4 76 aa8.14□□□□□ -1.11
CUX1-207ENST00000465461 IGLV2-8P01709 118 aa8.14□□□□□ -1.11
CUX1-207ENST00000465461 MGST1P10620 155 aaKnown RBP8.14□□□□□ -1.11
CUX1-207ENST00000465461 S100A4P26447 101 aaKnown RBP8.14□□□□□ -1.11
CUX1-207ENST00000465461 ASIPP42127 132 aa8.14□□□□□ -1.11
CUX1-207ENST00000465461 FHL2Q14192 279 aa8.14□□□□□ -1.11
CUX1-207ENST00000465461 TOR2AQ5JU69 321 aa8.14□□□□□ -1.11
CUX1-207ENST00000465461 VSIG2Q96IQ7 327 aa8.14□□□□□ -1.11
CUX1-207ENST00000465461 TRBV20OR9-2A0A075B6H5 130 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 IGHV3-73A0A0B4J1V6 119 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 GNG4P50150 75 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 CEBPGP53567 150 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 ZNF876PQ49A33 203 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 ZNF506Q5JVG8 444 aa8.13□□□□□ -1.11
CUX1-207ENST00000465461 OR4C5Q8NGB2 326 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms