RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TRGV11A0A075B6L2 103 aa12.57□□□□□ -0.4
CPSF4-209ENST00000465132 HTN1P15515 57 aa12.57□□□□□ -0.4
CPSF4-209ENST00000465132 ANXA2RQ3ZCQ2 193 aa12.57□□□□□ -0.4
CPSF4-209ENST00000465132 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
CPSF4-209ENST00000465132 DERL1Q9BUN8 251 aa12.57□□□□□ -0.4
CPSF4-209ENST00000465132 MLST8Q9BVC4 326 aa12.57□□□□□ -0.4
CPSF4-209ENST00000465132 C11orf68Q9H3H3 251 aaKnown RBP12.57□□□□□ -0.4
CPSF4-209ENST00000465132 SDF2L1Q9HCN8 221 aa12.57□□□□□ -0.4
CPSF4-209ENST00000465132 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
CPSF4-209ENST00000465132 TDRG1Q3Y452 100 aa12.56□□□□□ -0.4
CPSF4-209ENST00000465132 X6R8D5 127 aa12.56□□□□□ -0.4
CPSF4-209ENST00000465132 FRAS1Q86XX4 4008 aa12.55□□□□□ -0.4
CPSF4-209ENST00000465132 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
CPSF4-209ENST00000465132 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
CPSF4-209ENST00000465132 PRR9Q5T870 116 aa12.55□□□□□ -0.4
CPSF4-209ENST00000465132 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
CPSF4-209ENST00000465132 NAGKQ9UJ70 344 aa12.55□□□□□ -0.4
CPSF4-209ENST00000465132 XKRY2A2RUG3 117 aa12.54□□□□□ -0.4
CPSF4-209ENST00000465132 LINC00862A6NCI5 91 aa12.54□□□□□ -0.4
CPSF4-209ENST00000465132 TMEM241Q24JQ0 296 aa12.54□□□□□ -0.4
CPSF4-209ENST00000465132 IBA57Q5T440 356 aaKnown RBP12.54□□□□□ -0.4
CPSF4-209ENST00000465132 PHLDA1Q8WV24 401 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-209ENST00000465132 IGHV4-28A0A0C4DH34 117 aa12.53□□□□□ -0.4
CPSF4-209ENST00000465132 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
CPSF4-209ENST00000465132 ORM1P02763 201 aa12.53□□□□□ -0.4
CPSF4-209ENST00000465132 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
CPSF4-209ENST00000465132 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
CPSF4-209ENST00000465132 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
CPSF4-209ENST00000465132 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
CPSF4-209ENST00000465132 PRR27Q6MZM9 219 aa12.53□□□□□ -0.4
CPSF4-209ENST00000465132 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
CPSF4-209ENST00000465132 NAT8Q9UHE5 227 aa12.53□□□□□ -0.4
CPSF4-209ENST00000465132 B4DEV8 164 aa12.52□□□□□ -0.41
CPSF4-209ENST00000465132 SH2D1AO60880 128 aa12.52□□□□□ -0.41
CPSF4-209ENST00000465132 RPS20P60866 119 aaKnown RBP12.52□□□□□ -0.41
CPSF4-209ENST00000465132 MUC21Q5SSG8 566 aa12.52□□□□□ -0.41
CPSF4-209ENST00000465132 LGALS9CQ6DKI2 356 aa12.52□□□□□ -0.41
CPSF4-209ENST00000465132 COMMD7Q86VX2 200 aa12.52□□□□□ -0.41
CPSF4-209ENST00000465132 Q8NAQ8 132 aa12.52□□□□□ -0.41
CPSF4-209ENST00000465132 KRTAP17-1Q9BYP8 105 aa12.52□□□□□ -0.41
CPSF4-209ENST00000465132 TIMM8BQ9Y5J9 83 aaPredicted RBP12.52□□□□□ -0.41
CPSF4-209ENST00000465132 LYRM9A8MSI8 78 aa12.51□□□□□ -0.41
CPSF4-209ENST00000465132 P01737 135 aa12.51□□□□□ -0.41
CPSF4-209ENST00000465132 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
CPSF4-209ENST00000465132 SPART-AS1P0CW21 52 aa12.51□□□□□ -0.41
CPSF4-209ENST00000465132 S100A4P26447 101 aaKnown RBP12.51□□□□□ -0.41
CPSF4-209ENST00000465132 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
CPSF4-209ENST00000465132 OR5I1Q13606 314 aa12.51□□□□□ -0.41
CPSF4-209ENST00000465132 SPXQ9BT56 116 aa12.51□□□□□ -0.41
CPSF4-209ENST00000465132 TRBV20OR9-2A0A075B6H5 130 aa12.5□□□□□ -0.41
CPSF4-209ENST00000465132 ASIPP42127 132 aa12.5□□□□□ -0.41
CPSF4-209ENST00000465132 SRSF3P84103 164 aaKnown RBP12.5□□□□□ -0.41
CPSF4-209ENST00000465132 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
CPSF4-209ENST00000465132 OCC1Q8TAD7 63 aa12.5□□□□□ -0.41
CPSF4-209ENST00000465132 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
CPSF4-209ENST00000465132 TP53TG3Q9ULZ0 132 aa12.5□□□□□ -0.41
CPSF4-209ENST00000465132 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
CPSF4-209ENST00000465132 CXCL1P09341 107 aa12.49□□□□□ -0.41
CPSF4-209ENST00000465132 PNRC1Q12796 327 aaPredicted RBP12.49□□□□□ -0.41
CPSF4-209ENST00000465132 DAZ2Q13117 558 aaKnown RBP12.49□□□□□ -0.41
CPSF4-209ENST00000465132 C15orf54Q8N8G6 183 aa12.49□□□□□ -0.41
CPSF4-209ENST00000465132 CRIP1P50238 77 aa12.48□□□□□ -0.41
CPSF4-209ENST00000465132 EMP1P54849 157 aa12.48□□□□□ -0.41
CPSF4-209ENST00000465132 NANOS2P60321 138 aaKnown RBP12.48□□□□□ -0.41
CPSF4-209ENST00000465132 NDUFA5Q16718 116 aa12.48□□□□□ -0.41
CPSF4-209ENST00000465132 FAM231DQ6ZW35 169 aa12.48□□□□□ -0.41
CPSF4-209ENST00000465132 LINC01551Q86U37 167 aa12.48□□□□□ -0.41
CPSF4-209ENST00000465132 HERC2O95714 4834 aa12.48□□□□□ -0.41
CPSF4-209ENST00000465132 KRBOX1C9JBD0 128 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 C9JQL5 133 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 AZU1P20160 251 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 TCL1AP56279 114 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 ERVFC1-1P60608 527 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 DNLZQ5SXM8 178 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 C11orf45Q8TAV5 145 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 NDUFAF3Q9BU61 184 aa12.47□□□□□ -0.41
CPSF4-209ENST00000465132 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
CPSF4-209ENST00000465132 C19orf71A6NCJ1 209 aa12.46□□□□□ -0.41
CPSF4-209ENST00000465132 PGPEP1LA6NFU8 196 aa12.46□□□□□ -0.41
CPSF4-209ENST00000465132 M0R036 132 aa12.46□□□□□ -0.41
CPSF4-209ENST00000465132 TYMSP04818 313 aa12.46□□□□□ -0.41
CPSF4-209ENST00000465132 GSN-AS1Q9NRJ2 163 aa12.46□□□□□ -0.41
CPSF4-209ENST00000465132 DNAH10Q8IVF4 4471 aa12.46□□□□□ -0.41
CPSF4-209ENST00000465132 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 F8W036 122 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 MED14OSP0DP75 135 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 ADIRFQ15847 76 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 C11orf72Q8NBR9 251 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 OR2D3Q8NGH3 330 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 IL36BQ9NZH7 164 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 DKK2Q9UBU2 259 aa12.45□□□□□ -0.42
CPSF4-209ENST00000465132 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 A0A1W2PPQ1 181 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 A8MWL6 223 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 DEFB4AO15263 64 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 GNRH2O43555 120 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 GATCO43716 136 aaKnown RBP12.44□□□□□ -0.42
CPSF4-209ENST00000465132 DAD1P61803 113 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 CT83Q5H943 113 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms