RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 CLPSL1A2RUU4 121 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 SRSF2Q01130 221 aaKnown RBP9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 ZNF418Q8TF45 676 aaPredicted RBP9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 PTH2Q96A98 100 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 MYMXA0A1B0GTQ4 84 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 G3V318 75 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 M0R381 172 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 KLHL30-AS1Q8NEE0 82 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 PRSS29PA6NIE9 313 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 OR11H12B2RN74 326 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 HLA-DRB4P13762 266 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 EMP1P54849 157 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 ZFP2Q6ZN57 461 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 PLEKHB2Q96CS7 222 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 SCGB3A1Q96QR1 104 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 ATP6V0BQ99437 205 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 HLA-DRB4X5D2U9 266 aa9.63□□□□□ -0.87
CLCNKA-204ENST00000464764 F8VRH5 84 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 J3QR89 54 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 NDUFS8O00217 210 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 LGALS1P09382 135 aaKnown RBP9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 CKS1BP61024 79 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 TMEM78Q5T7P6 136 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 VMO1Q7Z5L0 202 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 VKORC1Q9BQB6 163 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 CUBNO60494 3623 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 H7C1H1 209 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 HOXA3O43365 443 aaPredicted RBP9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 PSMG4Q5JS54 123 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 LINC01549A6NIU2 74 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 ODF3BA8MYP8 253 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 PLNP26678 52 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 NFE4Q86UQ8 179 aa9.62□□□□□ -0.87
CLCNKA-204ENST00000464764 FAM90A27PA6NNH2 459 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 APOMO95445 188 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 ZNF502Q8TBZ5 544 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 GLMPQ8WWB7 406 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 SMIM2Q9BVW6 85 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 MRPL16Q9NX20 251 aaKnown RBP9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 TAL2Q16559 108 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
CLCNKA-204ENST00000464764 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 A0A1B0GV72 72 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 PRTN3P24158 256 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 RASL10AQ92737 203 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 HIF1ANQ9NWT6 349 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 RAXQ9Y2V3 346 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 SORL1Q92673 2214 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 SLC25A16P16260 332 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 PSMB2P49721 201 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 FHL3Q13643 280 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 Q8N9W7 124 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 SYT8Q8NBV8 401 aa9.6□□□□□ -0.87
CLCNKA-204ENST00000464764 ATP6V0E1O15342 81 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 SCGB1A1P11684 91 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 Q8N6K4 173 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 NEXN-AS1Q8NBZ9 246 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 LINC00527Q9UJ94 153 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 C20orf173Q96LM9 149 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 SPG11Q96JI7 2443 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 ZFP36P26651 326 aaKnown RBP9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 FOXI1Q12951 378 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 BAALCQ8WXS3 180 aa9.59□□□□□ -0.87
CLCNKA-204ENST00000464764 PRSS47A8MTI9 375 aa9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 MGPP08493 103 aa9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 SUMO2P61956 95 aaKnown RBP9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 SRSF9Q13242 221 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 CDSNQ15517 529 aa9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 RBAKDNA6NC62 111 aa9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 CDIP1Q9H305 208 aa9.58□□□□□ -0.88
CLCNKA-204ENST00000464764 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 MT-ATP8P03928 68 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 TOMM6Q96B49 74 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 CFAP126Q5VTH2 177 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 SLC50A1Q9BRV3 221 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 TSPAN13O95857 204 aa9.57□□□□□ -0.88
CLCNKA-204ENST00000464764 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
CLCNKA-204ENST00000464764 GNRH2O43555 120 aa9.56□□□□□ -0.88
CLCNKA-204ENST00000464764 SCGB2A1O75556 95 aa9.56□□□□□ -0.88
CLCNKA-204ENST00000464764 DUSP14O95147 198 aaKnown RBP9.56□□□□□ -0.88
CLCNKA-204ENST00000464764 F6UB75 175 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms