RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
HMGN1-209ENST00000463631 NAGKQ9UJ70 344 aa11.49□□□□□ -0.57
HMGN1-209ENST00000463631 FBLL1A6NHQ2 334 aaKnown RBP11.48□□□□□ -0.57
HMGN1-209ENST00000463631 OR10J3Q5JRS4 329 aa11.48□□□□□ -0.57
HMGN1-209ENST00000463631 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
HMGN1-209ENST00000463631 DEFB104AQ8WTQ1 72 aa11.48□□□□□ -0.57
HMGN1-209ENST00000463631 WDR61Q9GZS3 305 aaKnown RBP11.48□□□□□ -0.57
HMGN1-209ENST00000463631 LELP1Q5T871 98 aa11.47□□□□□ -0.57
HMGN1-209ENST00000463631 TM2D2Q9BX73 214 aa11.47□□□□□ -0.57
HMGN1-209ENST00000463631 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 GNRH2O43555 120 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 CIDEAO60543 219 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 TYMSP04818 313 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 RHOHQ15669 191 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 KHDC3LQ587J8 217 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 KCNS1Q96KK3 526 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 ATP5SQ99766 215 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 SDF2L1Q9HCN8 221 aa11.46□□□□□ -0.57
HMGN1-209ENST00000463631 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
HMGN1-209ENST00000463631 H2AFB2P0C5Z0 115 aa11.45□□□□□ -0.58
HMGN1-209ENST00000463631 WFDC2Q14508 124 aa11.45□□□□□ -0.58
HMGN1-209ENST00000463631 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
HMGN1-209ENST00000463631 PRADC1Q9BSG0 188 aa11.45□□□□□ -0.58
HMGN1-209ENST00000463631 OTORQ9NRC9 128 aa11.45□□□□□ -0.58
HMGN1-209ENST00000463631 HMCN2Q8NDA2 5059 aa11.45□□□□□ -0.58
HMGN1-209ENST00000463631 IGHV3-30P01768 117 aa11.44□□□□□ -0.58
HMGN1-209ENST00000463631 IGHV3-33P01772 117 aa11.44□□□□□ -0.58
HMGN1-209ENST00000463631 IGHV3-30-3P0DP02 117 aa11.44□□□□□ -0.58
HMGN1-209ENST00000463631 IGHV3-30-5P0DP03 117 aa11.44□□□□□ -0.58
HMGN1-209ENST00000463631 TAS2R45P59539 299 aa11.44□□□□□ -0.58
HMGN1-209ENST00000463631 SERTAD4-AS1Q5TG53 156 aa11.44□□□□□ -0.58
HMGN1-209ENST00000463631 CFAP126Q5VTH2 177 aa11.44□□□□□ -0.58
HMGN1-209ENST00000463631 RS1O15537 224 aa11.43□□□□□ -0.58
HMGN1-209ENST00000463631 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
HMGN1-209ENST00000463631 ASB13Q8WXK3 278 aa11.43□□□□□ -0.58
HMGN1-209ENST00000463631 GTSF1LQ9H1H1 148 aa11.43□□□□□ -0.58
HMGN1-209ENST00000463631 LRP1Q07954 4544 aaKnown RBP11.43□□□□□ -0.58
HMGN1-209ENST00000463631 FAM74A1Q5RGS3 127 aa11.42□□□□□ -0.58
HMGN1-209ENST00000463631 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
HMGN1-209ENST00000463631 TVP23CQ96ET8 276 aa11.42□□□□□ -0.58
HMGN1-209ENST00000463631 HYLS1Q96M11 299 aa11.42□□□□□ -0.58
HMGN1-209ENST00000463631 TREM1Q9NP99 234 aa11.42□□□□□ -0.58
HMGN1-209ENST00000463631 OR5AC2Q9NZP5 309 aa11.42□□□□□ -0.58
HMGN1-209ENST00000463631 TRAV8-3A0A0A6YYJ7 113 aa11.41□□□□□ -0.58
HMGN1-209ENST00000463631 F6UZH7 168 aa11.41□□□□□ -0.58
HMGN1-209ENST00000463631 MGST1P10620 155 aaKnown RBP11.41□□□□□ -0.58
HMGN1-209ENST00000463631 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
HMGN1-209ENST00000463631 DPPA3Q6W0C5 159 aa11.41□□□□□ -0.58
HMGN1-209ENST00000463631 GOLT1AQ6ZVE7 132 aa11.41□□□□□ -0.58
HMGN1-209ENST00000463631 NMES1Q9C002 83 aa11.41□□□□□ -0.58
HMGN1-209ENST00000463631 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 PGPA6NDG6 321 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 H0YIZ8 118 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 KRTAP10-4P60372 401 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-209ENST00000463631 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 PTH2Q96A98 100 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 SH3BGRL3Q9H299 93 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.58
HMGN1-209ENST00000463631 FAM240BA0A1B0GVZ2 78 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 LINC00694P0DN24 101 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 ASAH1Q13510 395 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 TOR2AQ5JU69 321 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 Q8N3U1 123 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 CCDC32Q9BV29 185 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
HMGN1-209ENST00000463631 LRRC37A5PQ49AS3 106 aa11.38□□□□□ -0.59
HMGN1-209ENST00000463631 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
HMGN1-209ENST00000463631 COX11Q9Y6N1 276 aa11.38□□□□□ -0.59
HMGN1-209ENST00000463631 LECT2O14960 151 aa11.37□□□□□ -0.59
HMGN1-209ENST00000463631 SIX6O95475 246 aa11.37□□□□□ -0.59
HMGN1-209ENST00000463631 OXTP01178 125 aa11.37□□□□□ -0.59
HMGN1-209ENST00000463631 ZNF506Q5JVG8 444 aa11.37□□□□□ -0.59
HMGN1-209ENST00000463631 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
HMGN1-209ENST00000463631 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-209ENST00000463631 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
HMGN1-209ENST00000463631 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
HMGN1-209ENST00000463631 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
HMGN1-209ENST00000463631 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
HMGN1-209ENST00000463631 HSPB11Q9Y547 144 aa11.36□□□□□ -0.59
HMGN1-209ENST00000463631 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
HMGN1-209ENST00000463631 TAAR5O14804 337 aa11.35□□□□□ -0.59
HMGN1-209ENST00000463631 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
HMGN1-209ENST00000463631 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
HMGN1-209ENST00000463631 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
HMGN1-209ENST00000463631 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
HMGN1-209ENST00000463631 FAT3Q8TDW7 4589 aa11.34□□□□□ -0.59
HMGN1-209ENST00000463631 A0A087WWC5 75 aa11.34□□□□□ -0.59
HMGN1-209ENST00000463631 PGPEP1LA6NFU8 196 aa11.34□□□□□ -0.59
HMGN1-209ENST00000463631 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
HMGN1-209ENST00000463631 EIF3GO75821 320 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGN1-209ENST00000463631 RNASE3P12724 160 aaKnown RBP11.34□□□□□ -0.59
HMGN1-209ENST00000463631 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-209ENST00000463631 GNG5P63218 68 aa11.34□□□□□ -0.59
HMGN1-209ENST00000463631 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
HMGN1-209ENST00000463631 MZT2BQ6NZ67 158 aa11.34□□□□□ -0.59
HMGN1-209ENST00000463631 SCGB1C1Q8TD33 95 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 317.9 ms