RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 RPH3ALQ9UNE2 315 aa14.04□□□□□ -0.16
PDLIM4-205ENST00000463615 K7EQD1 137 aa14.03□□□□□ -0.16
PDLIM4-205ENST00000463615 HMGB3O15347 200 aaKnown RBP14.03□□□□□ -0.16
PDLIM4-205ENST00000463615 SFTA3P0C7M3 94 aa14.03□□□□□ -0.16
PDLIM4-205ENST00000463615 SPATA12Q7Z6I5 190 aa14.03□□□□□ -0.16
PDLIM4-205ENST00000463615 ABCA13Q86UQ4 5058 aa14.02□□□□□ -0.16
PDLIM4-205ENST00000463615 K7EP13 123 aa14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 GNRH2O43555 120 aa14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 TCRAP04437 139 aa14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 TYMSP04818 313 aa14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 GIPP09681 153 aaPredicted RBP14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 GCHFRP30047 84 aa14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 GNG5P63218 68 aa14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 TNFSF18Q9UNG2 199 aa14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 APOBP04114 4563 aaKnown RBP14.02□□□□□ -0.17
PDLIM4-205ENST00000463615 SRIP30626 198 aa14.01□□□□□ -0.17
PDLIM4-205ENST00000463615 SDF2L1Q9HCN8 221 aa14.01□□□□□ -0.17
PDLIM4-205ENST00000463615 TMEM167BQ9NRX6 74 aa14.01□□□□□ -0.17
PDLIM4-205ENST00000463615 NAGKQ9UJ70 344 aa14.01□□□□□ -0.17
PDLIM4-205ENST00000463615 F6UZH7 168 aa14□□□□□ -0.17
PDLIM4-205ENST00000463615 Q5BKY6 102 aa14□□□□□ -0.17
PDLIM4-205ENST00000463615 NDFIP1Q9BT67 221 aa14□□□□□ -0.17
PDLIM4-205ENST00000463615 FBLL1A6NHQ2 334 aaKnown RBP13.99□□□□□ -0.17
PDLIM4-205ENST00000463615 C9JCJ5 164 aa13.99□□□□□ -0.17
PDLIM4-205ENST00000463615 IGLV2-11P01706 119 aa13.99□□□□□ -0.17
PDLIM4-205ENST00000463615 GYPEP15421 78 aa13.99□□□□□ -0.17
PDLIM4-205ENST00000463615 KRTAP10-2P60368 255 aa13.99□□□□□ -0.17
PDLIM4-205ENST00000463615 OR4C5Q8NGB2 326 aa13.99□□□□□ -0.17
PDLIM4-205ENST00000463615 PCNPQ8WW12 178 aaKnown RBP13.99□□□□□ -0.17
PDLIM4-205ENST00000463615 RNF222A6NCQ9 220 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 K7EQM0 130 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 CIDEAO60543 219 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 CXorf1O96002 111 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 TIRAPP58753 221 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 SH2D6Q7Z4S9 175 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 NFE4Q86UQ8 179 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 PTH2Q96A98 100 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 TXNDC17Q9BRA2 123 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 KRTAP4-5Q9BYR2 181 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 ACTR3CQ9C0K3 210 aaPredicted RBP13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 EPDR1Q9UM22 224 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 PSG8Q9UQ74 426 aa13.98□□□□□ -0.17
PDLIM4-205ENST00000463615 TRAV9-2A0A087WT02 112 aa13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 GGTLC3B5MD39 225 aa13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 TAAR5O14804 337 aa13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 GATA1P15976 413 aaPredicted RBP13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 ZNF80P51504 273 aaPredicted RBP13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 SUMO1P63165 101 aaKnown RBP13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 INO80EQ8NBZ0 244 aaPredicted RBP13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 SH3BGRL3Q9H299 93 aa13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 C11orf21Q9P2W6 132 aa13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 LY96Q9Y6Y9 160 aa13.97□□□□□ -0.17
PDLIM4-205ENST00000463615 A0A1W2PRE2 83 aa13.96□□□□□ -0.17
PDLIM4-205ENST00000463615 PFN1P07737 140 aaKnown RBP13.96□□□□□ -0.17
PDLIM4-205ENST00000463615 DNAH10OSP0CZ25 163 aa13.96□□□□□ -0.17
PDLIM4-205ENST00000463615 FLI1Q01543 452 aaPredicted RBP13.96□□□□□ -0.17
PDLIM4-205ENST00000463615 CYB561D1Q8N8Q1 229 aa13.96□□□□□ -0.17
PDLIM4-205ENST00000463615 TMEM75Q8N9X5 138 aa13.96□□□□□ -0.17
PDLIM4-205ENST00000463615 SGK494Q96LW2 274 aa13.96□□□□□ -0.17
PDLIM4-205ENST00000463615 RPL7L1Q6DKI1 246 aaKnown RBP13.95□□□□□ -0.18
PDLIM4-205ENST00000463615 C9orf85Q96MD7 179 aa13.95□□□□□ -0.18
PDLIM4-205ENST00000463615 GCGP01275 180 aa13.94□□□□□ -0.18
PDLIM4-205ENST00000463615 SMUG1Q53HV7 270 aa13.94□□□□□ -0.18
PDLIM4-205ENST00000463615 SAPCD1Q5SSQ6 148 aa13.94□□□□□ -0.18
PDLIM4-205ENST00000463615 WFDC10BQ8IUB3 73 aa13.94□□□□□ -0.18
PDLIM4-205ENST00000463615 PGPEP1Q9NXJ5 209 aa13.94□□□□□ -0.18
PDLIM4-205ENST00000463615 BORCS7-ASMTA0A0B4J1R7 106 aa13.93□□□□□ -0.18
PDLIM4-205ENST00000463615 RS1O15537 224 aa13.93□□□□□ -0.18
PDLIM4-205ENST00000463615 ZNF876PQ49A33 203 aa13.93□□□□□ -0.18
PDLIM4-205ENST00000463615 CTXND1A0A1B0GTU2 59 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 TRBV6-4A0A1B0GX49 114 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 EVI2AP22794 236 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 ZNF726P1Q15940 193 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 ZFP69Q49AA0 526 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 CFAP126Q5VTH2 177 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 CDPF1Q6NVV7 123 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 MAPKAPK5-AS1Q8N8E1 139 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 TNFRSF18Q9Y5U5 241 aa13.92□□□□□ -0.18
PDLIM4-205ENST00000463615 G3V3Q6 166 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 ERVFC1-1P60608 527 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 PIK3CD-AS1Q5SR53 167 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 PRNTQ86SH4 94 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 Q8N1X5 172 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 C10orf126Q8N4M7 172 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 OR2T35Q8NGX2 323 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 MSRB1Q9NZV6 116 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 BOLA1Q9Y3E2 137 aa13.91□□□□□ -0.18
PDLIM4-205ENST00000463615 FXYD6-FXYD2A0A087WZ82 144 aa13.9□□□□□ -0.18
PDLIM4-205ENST00000463615 LOC100131303A0A0U1RQF7 123 aa13.9□□□□□ -0.18
PDLIM4-205ENST00000463615 EREGO14944 169 aa13.9□□□□□ -0.18
PDLIM4-205ENST00000463615 RNASE3P12724 160 aaKnown RBP13.9□□□□□ -0.18
PDLIM4-205ENST00000463615 DPPA3Q6W0C5 159 aa13.9□□□□□ -0.18
PDLIM4-205ENST00000463615 SLC25A29Q8N8R3 303 aa13.9□□□□□ -0.18
PDLIM4-205ENST00000463615 NKX6-2Q9C056 277 aaPredicted RBP13.9□□□□□ -0.18
PDLIM4-205ENST00000463615 RHOHQ15669 191 aa13.89□□□□□ -0.19
PDLIM4-205ENST00000463615 ZNF506Q5JVG8 444 aa13.88□□□□□ -0.19
PDLIM4-205ENST00000463615 COX8CQ7Z4L0 72 aa13.88□□□□□ -0.19
PDLIM4-205ENST00000463615 PRADC1Q9BSG0 188 aa13.88□□□□□ -0.19
PDLIM4-205ENST00000463615 A0A087WTM6 91 aa13.87□□□□□ -0.19
PDLIM4-205ENST00000463615 PGPEP1LA6NFU8 196 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms