RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 TRAV12-3A0A0B4J271 114 aa16.19■□□□□ 0.18
SSNA1-203ENST00000463511 GPX1P07203 203 aa16.19■□□□□ 0.18
SSNA1-203ENST00000463511 HTN1P15515 57 aa16.19■□□□□ 0.18
SSNA1-203ENST00000463511 PRR9Q5T870 116 aa16.19■□□□□ 0.18
SSNA1-203ENST00000463511 TMEM75Q8N9X5 138 aa16.19■□□□□ 0.18
SSNA1-203ENST00000463511 C20orf144Q9BQM9 153 aa16.19■□□□□ 0.18
SSNA1-203ENST00000463511 PSG8Q9UQ74 426 aa16.19■□□□□ 0.18
SSNA1-203ENST00000463511 TRAV34A0A0B4J273 112 aa16.18■□□□□ 0.18
SSNA1-203ENST00000463511 C7orf71A4D174 169 aa16.18■□□□□ 0.18
SSNA1-203ENST00000463511 CBY3A6NI87 242 aa16.18■□□□□ 0.18
SSNA1-203ENST00000463511 RNASE4P34096 147 aaKnown RBP16.18■□□□□ 0.18
SSNA1-203ENST00000463511 FLI1Q01543 452 aaPredicted RBP16.18■□□□□ 0.18
SSNA1-203ENST00000463511 BTN1A1Q13410 526 aa16.18■□□□□ 0.18
SSNA1-203ENST00000463511 TMEM256Q8N2U0 113 aa16.18■□□□□ 0.18
SSNA1-203ENST00000463511 TCEAL7Q9BRU2 100 aa16.18■□□□□ 0.18
SSNA1-203ENST00000463511 APOBP04114 4563 aaKnown RBP16.17■□□□□ 0.18
SSNA1-203ENST00000463511 F6UZH7 168 aa16.17■□□□□ 0.18
SSNA1-203ENST00000463511 ZNF324O75467 553 aaPredicted RBP16.17■□□□□ 0.18
SSNA1-203ENST00000463511 C16orf74Q96GX8 76 aa16.17■□□□□ 0.18
SSNA1-203ENST00000463511 FBLL1A6NHQ2 334 aaKnown RBP16.16■□□□□ 0.18
SSNA1-203ENST00000463511 TAS2R60P59551 318 aa16.16■□□□□ 0.18
SSNA1-203ENST00000463511 Q6ZQT7 251 aa16.16■□□□□ 0.18
SSNA1-203ENST00000463511 PRNTQ86SH4 94 aa16.16■□□□□ 0.18
SSNA1-203ENST00000463511 TREM1Q9NP99 234 aa16.15■□□□□ 0.18
SSNA1-203ENST00000463511 KLF12Q9Y4X4 402 aa16.15■□□□□ 0.18
SSNA1-203ENST00000463511 TIMM8BQ9Y5J9 83 aaPredicted RBP16.15■□□□□ 0.18
SSNA1-203ENST00000463511 SCO2A0A1W2PP80 73 aa16.14■□□□□ 0.17
SSNA1-203ENST00000463511 H7BYZ3 331 aa16.14■□□□□ 0.17
SSNA1-203ENST00000463511 IFNA1P01562 189 aa16.14■□□□□ 0.17
SSNA1-203ENST00000463511 BCL2P10415 239 aa16.14■□□□□ 0.17
SSNA1-203ENST00000463511 C8orf49Q96NF6 230 aa16.14■□□□□ 0.17
SSNA1-203ENST00000463511 TXNDC17Q9BRA2 123 aa16.14■□□□□ 0.17
SSNA1-203ENST00000463511 NOP10Q9NPE3 64 aaKnown RBP16.14■□□□□ 0.17
SSNA1-203ENST00000463511 SPATA12Q7Z6I5 190 aa16.13■□□□□ 0.17
SSNA1-203ENST00000463511 PCNPQ8WW12 178 aaKnown RBP16.13■□□□□ 0.17
SSNA1-203ENST00000463511 NDFIP1Q9BT67 221 aa16.13■□□□□ 0.17
SSNA1-203ENST00000463511 AKR1C3P42330 323 aa16.12■□□□□ 0.17
SSNA1-203ENST00000463511 MEF2BQ02080 365 aaPredicted RBP16.12■□□□□ 0.17
SSNA1-203ENST00000463511 TMEM183BQ1AE95 376 aa16.12■□□□□ 0.17
SSNA1-203ENST00000463511 Q6AWC8 147 aa16.12■□□□□ 0.17
SSNA1-203ENST00000463511 RNASE8Q8TDE3 154 aaKnown RBP16.12■□□□□ 0.17
SSNA1-203ENST00000463511 TMEM263Q8WUH6 116 aaKnown RBP16.12■□□□□ 0.17
SSNA1-203ENST00000463511 FMC1Q96HJ9 113 aa16.12■□□□□ 0.17
SSNA1-203ENST00000463511 KRTAP1-5Q9BYS1 174 aa16.12■□□□□ 0.17
SSNA1-203ENST00000463511 Q9H8V8 135 aa16.12■□□□□ 0.17
SSNA1-203ENST00000463511 VAX2Q9UIW0 290 aa16.12■□□□□ 0.17
SSNA1-203ENST00000463511 TRBV6-1A0A0K0K1D8 114 aa16.11■□□□□ 0.17
SSNA1-203ENST00000463511 SAPCD1Q5SSQ6 148 aa16.11■□□□□ 0.17
SSNA1-203ENST00000463511 ZNF493Q6ZR52 646 aa16.11■□□□□ 0.17
SSNA1-203ENST00000463511 Q86TA4 180 aa16.11■□□□□ 0.17
SSNA1-203ENST00000463511 C11orf52Q96A22 123 aa16.11■□□□□ 0.17
SSNA1-203ENST00000463511 PYGO2Q9BRQ0 406 aa16.11■□□□□ 0.17
SSNA1-203ENST00000463511 TAGLN2P37802 199 aaKnown RBP16.1■□□□□ 0.17
SSNA1-203ENST00000463511 OR5I1Q13606 314 aa16.1■□□□□ 0.17
SSNA1-203ENST00000463511 Q8N1X5 172 aa16.1■□□□□ 0.17
SSNA1-203ENST00000463511 LINC00467Q9BRT7 94 aa16.1■□□□□ 0.17
SSNA1-203ENST00000463511 TRAV26-1A0A087WT03 109 aa16.09■□□□□ 0.17
SSNA1-203ENST00000463511 RBFOX3A6NFN3 312 aa16.09■□□□□ 0.17
SSNA1-203ENST00000463511 ZNF80P51504 273 aaPredicted RBP16.09■□□□□ 0.17
SSNA1-203ENST00000463511 UBE2G1P62253 170 aa16.09■□□□□ 0.17
SSNA1-203ENST00000463511 S100A9P06702 114 aaKnown RBP16.08■□□□□ 0.16
SSNA1-203ENST00000463511 TTC32Q5I0X7 151 aa16.08■□□□□ 0.16
SSNA1-203ENST00000463511 ZFP30Q9Y2G7 519 aa16.08■□□□□ 0.16
SSNA1-203ENST00000463511 A0A0J9YY99 117 aa16.07■□□□□ 0.16
SSNA1-203ENST00000463511 PDE6DO43924 150 aa16.07■□□□□ 0.16
SSNA1-203ENST00000463511 LTAP01374 205 aa16.07■□□□□ 0.16
SSNA1-203ENST00000463511 SMUG1Q53HV7 270 aa16.07■□□□□ 0.16
SSNA1-203ENST00000463511 SCRT2Q9NQ03 307 aa16.07■□□□□ 0.16
SSNA1-203ENST00000463511 DNAH5Q8TE73 4624 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 IGHV1OR15-1A0A075B7D0 117 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 RGS13O14921 159 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 GCGP01275 180 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 KRTAP10-2P60368 255 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 IFITM2Q01629 132 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 ZNF506Q5JVG8 444 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 COX8CQ7Z4L0 72 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 EIF4E3Q8N5X7 224 aaKnown RBP16.06■□□□□ 0.16
SSNA1-203ENST00000463511 LINC00612Q8N6U2 182 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 DERL1Q9BUN8 251 aa16.06■□□□□ 0.16
SSNA1-203ENST00000463511 TRAV21A0A0B4J279 112 aa16.05■□□□□ 0.16
SSNA1-203ENST00000463511 HOXA5P20719 270 aa16.05■□□□□ 0.16
SSNA1-203ENST00000463511 RPL35P42766 123 aaKnown RBP16.05■□□□□ 0.16
SSNA1-203ENST00000463511 ANXA2RQ3ZCQ2 193 aa16.05■□□□□ 0.16
SSNA1-203ENST00000463511 MUC21Q5SSG8 566 aa16.05■□□□□ 0.16
SSNA1-203ENST00000463511 FAM210AQ96ND0 272 aa16.05■□□□□ 0.16
SSNA1-203ENST00000463511 TP53TG3Q9ULZ0 132 aa16.05■□□□□ 0.16
SSNA1-203ENST00000463511 GAGE12BA1L429 117 aa16.04■□□□□ 0.16
SSNA1-203ENST00000463511 GAGE7O76087 117 aa16.04■□□□□ 0.16
SSNA1-203ENST00000463511 GAGE12FP0CL80 117 aa16.04■□□□□ 0.16
SSNA1-203ENST00000463511 GAGE12GP0CL81 117 aa16.04■□□□□ 0.16
SSNA1-203ENST00000463511 GAGE12IP0CL82 117 aa16.04■□□□□ 0.16
SSNA1-203ENST00000463511 ZC2HC1AQ96GY0 325 aa16.04■□□□□ 0.16
SSNA1-203ENST00000463511 MED9Q9NWA0 146 aa16.04■□□□□ 0.16
SSNA1-203ENST00000463511 CRIP1P50238 77 aa16.03■□□□□ 0.16
SSNA1-203ENST00000463511 ESRGQ1W209 222 aa16.03■□□□□ 0.16
SSNA1-203ENST00000463511 TOR2AQ5JU69 321 aa16.03■□□□□ 0.16
SSNA1-203ENST00000463511 TMEM183AQ8IXX5 376 aa16.03■□□□□ 0.16
SSNA1-203ENST00000463511 UPK3BQ9BT76 320 aa16.03■□□□□ 0.16
SSNA1-203ENST00000463511 C11orf21Q9P2W6 132 aa16.03■□□□□ 0.16
SSNA1-203ENST00000463511 PFN1P07737 140 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms