RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CLRN3Q8NCR9 226 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 NUDT10Q8NFP7 164 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 OR2D3Q8NGH3 330 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 TSKUQ8WUA8 353 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 NUDT11Q96G61 164 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 C16orf74Q96GX8 76 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 RPP21Q9H633 154 aaKnown RBP5.44□□□□□ -1.54
EPHA4-210ENST00000463446 RPS10P5Q9NQ39 176 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 XCL2Q9UBD3 114 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 NAT8BQ9UHF3 227 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 COL6A5A8TX70 2615 aa5.44□□□□□ -1.54
EPHA4-210ENST00000463446 C19orf71A6NCJ1 209 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 SNURFLB1AK76 121 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 M0R2Z0 102 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 IGLV2-8P01709 118 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 LGALS9BQ3B8N2 356 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 Q8TAT8 98 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 FRZBQ92765 325 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 PTH2Q96A98 100 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 RNF183Q96D59 192 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 ZC2HC1AQ96GY0 325 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 C8orf49Q96NF6 230 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 SPATA25Q9BR10 227 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 SORL1Q92673 2214 aa5.43□□□□□ -1.54
EPHA4-210ENST00000463446 TRBV20OR9-2A0A075B6H5 130 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 C7orf77A4D0Y5 90 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 RBMY1BA6NDE4 496 aaKnown RBP5.42□□□□□ -1.54
EPHA4-210ENST00000463446 RBMY1EA6NEQ0 496 aaKnown RBP5.42□□□□□ -1.54
EPHA4-210ENST00000463446 SH2D1AO60880 128 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 OR5AL1P0C617 328 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 RBMY1DP0C7P1 496 aaKnown RBP5.42□□□□□ -1.54
EPHA4-210ENST00000463446 FRMD6-AS1P0C7T7 363 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 ZNF415Q09FC8 603 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 RIGQ13278 110 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 GFI1BQ5VTD9 330 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 RASL11AQ6T310 242 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 ZNF705AQ6ZN79 300 aaPredicted RBP5.42□□□□□ -1.54
EPHA4-210ENST00000463446 MRAPQ8TCY5 172 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 TMEM263Q8WUH6 116 aaKnown RBP5.42□□□□□ -1.54
EPHA4-210ENST00000463446 SMCO4Q9NRQ5 59 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 AURKAIP1Q9NWT8 199 aaPredicted RBP5.42□□□□□ -1.54
EPHA4-210ENST00000463446 IL36BQ9NZH7 164 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 PHLDA3Q9Y5J5 127 aa5.42□□□□□ -1.54
EPHA4-210ENST00000463446 TIMM8BQ9Y5J9 83 aaPredicted RBP5.42□□□□□ -1.54
EPHA4-210ENST00000463446 TRAV12-2A0A075B6T6 113 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 J3KRW8 73 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 CRXO43186 299 aaPredicted RBP5.41□□□□□ -1.54
EPHA4-210ENST00000463446 TRGC1P0CF51 173 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 SMIM17P0DL12 118 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 HTN1P15515 57 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 CRIP1P50238 77 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 DAZ2Q13117 558 aaKnown RBP5.41□□□□□ -1.54
EPHA4-210ENST00000463446 SLAQ13239 276 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 ZNF124Q15973 351 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 RNF212Q495C1 297 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 ATP5L2Q7Z4Y8 100 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 FER1L6-AS1Q8NA97 138 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 NHLRC2Q8NBF2 726 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 CSNK1G2-AS1Q8NCQ2 148 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 OR11H2Q8NH07 326 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 RNASE7Q9H1E1 156 aaKnown RBP5.41□□□□□ -1.54
EPHA4-210ENST00000463446 NAGKQ9UJ70 344 aa5.41□□□□□ -1.54
EPHA4-210ENST00000463446 IGHV3OR16-12A0A075B7B8 117 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 A0A1B0GUT8 65 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 SMIM27A0A1W2PRY6 76 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 LYRM9A8MSI8 78 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 A8MWV9 139 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 K7EN84 100 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 M0R2P5 195 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 PPP1R17O96001 155 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 SPART-AS1P0CW21 52 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 FXYD7P58549 80 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 BTN1A1Q13410 526 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 SPANXN1Q5VSR9 72 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 ZFP82Q8N141 532 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 B9D2Q9BPU9 175 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 OVOL2Q9BRP0 275 aa5.4□□□□□ -1.54
EPHA4-210ENST00000463446 SSBP4Q9BWG4 385 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-210ENST00000463446 IGHV4-4A0A075B6R2 117 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 PGPEP1LA6NFU8 196 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 HIGD1CA8MV81 97 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 ARMS2P0C7Q2 107 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 ADCYAP1P18509 176 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 ZNF80P51504 273 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-210ENST00000463446 TCL1AP56279 114 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 DEFB1P60022 68 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 C1orf158Q8N1D5 194 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-210ENST00000463446 RASL10AQ92737 203 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 V9GYV3 84 aa5.39□□□□□ -1.55
EPHA4-210ENST00000463446 IGKV3D-20A0A0C4DH25 116 aa5.38□□□□□ -1.55
EPHA4-210ENST00000463446 K7EIL1 84 aa5.38□□□□□ -1.55
EPHA4-210ENST00000463446 RHODO00212 210 aa5.38□□□□□ -1.55
EPHA4-210ENST00000463446 GNRH2O43555 120 aa5.38□□□□□ -1.55
EPHA4-210ENST00000463446 SNAI2O43623 268 aa5.38□□□□□ -1.55
EPHA4-210ENST00000463446 ATP6V1G1O75348 118 aa5.38□□□□□ -1.55
EPHA4-210ENST00000463446 MT-ND6P03923 174 aa5.38□□□□□ -1.55
EPHA4-210ENST00000463446 GIG44P09565 113 aaPredicted RBP5.38□□□□□ -1.55
EPHA4-210ENST00000463446 DEFA6Q01524 100 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms