RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TP53TG3Q9ULZ0 132 aa10□□□□□ -0.81
PHACTR4-203ENST00000463428 PLAC8L1A1L4L8 177 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 KRBOX1C9JBD0 128 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 MIFP14174 115 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 NDUFA5Q16718 116 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 LINC01559Q495D7 138 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 NUDT10Q8NFP7 164 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 NUDT11Q96G61 164 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 SEC11CQ9BY50 192 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 ZMAT4Q9H898 229 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 F8W036 122 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 GNRH2O43555 120 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 HTN1P15515 57 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 RRN3P1Q2M238 152 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 C11orf72Q8NBR9 251 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 RNASE8Q8TDE3 154 aaKnown RBP9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 ISOC2Q96AB3 205 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 KCNS1Q96KK3 526 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 RNASE7Q9H1E1 156 aaKnown RBP9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 NAGKQ9UJ70 344 aa9.99□□□□□ -0.81
PHACTR4-203ENST00000463428 IGHV4-28A0A0C4DH34 117 aa9.98□□□□□ -0.81
PHACTR4-203ENST00000463428 ORM1P02763 201 aa9.98□□□□□ -0.81
PHACTR4-203ENST00000463428 TYMSP04818 313 aa9.98□□□□□ -0.81
PHACTR4-203ENST00000463428 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
PHACTR4-203ENST00000463428 COL7A1Q02388 2944 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 CBY3A6NI87 242 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 B4DEV8 164 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 M0R036 132 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 RPL19P84098 196 aaKnown RBP9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 ADIRFQ15847 76 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 DNLZQ5SXM8 178 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 DAZAP1Q96EP5 407 aaKnown RBP9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 OSTCQ9NRP0 149 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 MDFICQ9P1T7 246 aa9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 CARHSP1Q9Y2V2 147 aaKnown RBP9.97□□□□□ -0.81
PHACTR4-203ENST00000463428 MUC4Q99102 2169 aa9.96□□□□□ -0.81
PHACTR4-203ENST00000463428 IGHV3-16A0A0C4DH30 117 aa9.96□□□□□ -0.82
PHACTR4-203ENST00000463428 TMEM189A5PLL7 270 aa9.96□□□□□ -0.82
PHACTR4-203ENST00000463428 PNRC1Q12796 327 aaPredicted RBP9.96□□□□□ -0.82
PHACTR4-203ENST00000463428 IBA57Q5T440 356 aaKnown RBP9.96□□□□□ -0.82
PHACTR4-203ENST00000463428 IL17DQ8TAD2 202 aa9.96□□□□□ -0.82
PHACTR4-203ENST00000463428 C16orf74Q96GX8 76 aa9.96□□□□□ -0.82
PHACTR4-203ENST00000463428 TRGV11A0A075B6L2 103 aa9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 DEFB4AO15263 64 aa9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 P01737 135 aa9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 CXCL1P09341 107 aa9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 ERVFC1-1P60608 527 aa9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 OR2D3Q8NGH3 330 aa9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 GSN-AS1Q9NRJ2 163 aa9.95□□□□□ -0.82
PHACTR4-203ENST00000463428 TMSB15BA0A087X1C1 80 aa9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 GRIFINA4D1Z8 144 aa9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 GATCO43716 136 aaKnown RBP9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 TCL1AP56279 114 aa9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 SFRP2Q96HF1 295 aa9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 C11orf68Q9H3H3 251 aaKnown RBP9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 V9GYV3 84 aa9.94□□□□□ -0.82
PHACTR4-203ENST00000463428 DAZ2Q13117 558 aaKnown RBP9.93□□□□□ -0.82
PHACTR4-203ENST00000463428 OR10G8Q8NGN5 311 aa9.93□□□□□ -0.82
PHACTR4-203ENST00000463428 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
PHACTR4-203ENST00000463428 A0A0J9YWU9 116 aa9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 GZMBP10144 247 aa9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 RPS20P60866 119 aaKnown RBP9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 ZNF415Q09FC8 603 aa9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 CT83Q5H943 113 aa9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 SSBP4Q9BWG4 385 aaPredicted RBP9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 SCRT2Q9NQ03 307 aa9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 IL36BQ9NZH7 164 aa9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 U3KQK5 164 aa9.92□□□□□ -0.82
PHACTR4-203ENST00000463428 ARMS2P0C7Q2 107 aa9.91□□□□□ -0.82
PHACTR4-203ENST00000463428 IGLC6P0CF74 106 aa9.91□□□□□ -0.82
PHACTR4-203ENST00000463428 ASIPP42127 132 aa9.91□□□□□ -0.82
PHACTR4-203ENST00000463428 EMP1P54849 157 aa9.91□□□□□ -0.82
PHACTR4-203ENST00000463428 C15orf54Q8N8G6 183 aa9.91□□□□□ -0.82
PHACTR4-203ENST00000463428 NOP10Q9NPE3 64 aaKnown RBP9.91□□□□□ -0.82
PHACTR4-203ENST00000463428 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
PHACTR4-203ENST00000463428 SNURFLB1AK76 121 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 SNAI2O43623 268 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 SPINK4O60575 86 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 MED14OSP0DP75 135 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 RNF212Q495C1 297 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 SPXQ9BT56 116 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 EDA2RQ9HAV5 297 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 DKK2Q9UBU2 259 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 CELA1Q9UNI1 258 aa9.9□□□□□ -0.82
PHACTR4-203ENST00000463428 XKRY2A2RUG3 117 aa9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 A8MWL6 223 aa9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 H3BVH4 76 aa9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 APOC3P02656 99 aa9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 S100A4P26447 101 aaKnown RBP9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 FAM222AQ5U5X8 452 aa9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 LINC00612Q8N6U2 182 aa9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 GTSF1Q8WW33 167 aa9.9□□□□□ -0.83
PHACTR4-203ENST00000463428 PTH2Q96A98 100 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms