RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 M0R129 80 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 CORTO00230 105 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 GEMIN2O14893 280 aaKnown RBP1.85□□□□□ -2.11
USH2A-203ENST00000463147 SRP14P37108 136 aaKnown RBP1.85□□□□□ -2.11
USH2A-203ENST00000463147 EMP1P54849 157 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 YPEL3P61236 119 aaPredicted RBP1.85□□□□□ -2.11
USH2A-203ENST00000463147 RPL38P63173 70 aaKnown RBP1.85□□□□□ -2.11
USH2A-203ENST00000463147 SELENOWP63302 87 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 ELOBQ15370 118 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 TOMM20LQ6UXN7 152 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 MIR17HGQ75NE6 70 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 LINC00471Q8N535 108 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 DCANP1Q8TF63 244 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 SLC25A21Q9BQT8 299 aaPredicted RBP1.85□□□□□ -2.11
USH2A-203ENST00000463147 IMUPQ9GZP8 106 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 TAF9BQ9HBM6 251 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 OSTCQ9NRP0 149 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 CKLFQ9UBR5 152 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 UQCR10Q9UDW1 63 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 PCTPQ9UKL6 214 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 LAMTOR2Q9Y2Q5 125 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 NOP16Q9Y3C1 178 aaKnown RBP1.85□□□□□ -2.11
USH2A-203ENST00000463147 ALS2Q96Q42 1657 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 OBSL1O75147 1896 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 DOCK1Q14185 1865 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 RICTORQ6R327 1708 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 NRAPQ86VF7 1730 aa1.85□□□□□ -2.11
USH2A-203ENST00000463147 BAZ2BQ9UIF8 2168 aaKnown RBP1.85□□□□□ -2.11
USH2A-203ENST00000463147 ARFGEF1Q9Y6D6 1849 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 GBF1Q92538 1859 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TNRC6CQ9HCJ0 1690 aaKnown RBP1.84□□□□□ -2.11
USH2A-203ENST00000463147 BORCS7-ASMTA0A0B4J1R7 106 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TRAV1-2A0A0B4J238 106 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TRGV4A0A0C4DH28 118 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TRBV10-2A0A0K0K1G8 114 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 A0A1B0GW64 132 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 DUXBA0A1W2PPF3 345 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 A0A1W2PRS3 328 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TLCD2A6NGC4 264 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 OR51F1A6NGY5 319 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 ZNF727A8MUV8 499 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 H3BQ15 152 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 J3QR89 54 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 GNG7O60262 68 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 PRH1P02810 166 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 CXCL1P09341 107 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 GPX2P18283 190 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TPPP2P59282 170 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TMEM258P61165 79 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 BTG2P78543 158 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 ERHP84090 104 aaKnown RBP1.84□□□□□ -2.11
USH2A-203ENST00000463147 RHOGP84095 191 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 SSBP1Q04837 148 aaKnown RBP1.84□□□□□ -2.11
USH2A-203ENST00000463147 NCBP2-AS2Q69YL0 99 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 DPPA3Q6W0C5 159 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 GTF2H5Q6ZYL4 71 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 COMMD6Q7Z4G1 85 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 DEFB128Q7Z7B8 93 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TCTEX1D1Q8N7M0 179 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 OR4B1Q8NGF8 309 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 OR5A2Q8NGI9 324 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 OR5AK2Q8NH90 309 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 PPP1R1CQ8WVI7 109 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 PSMF1Q92530 271 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TSLPQ969D9 159 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 HSPB9Q9BQS6 159 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TMEM133Q9H2Q1 129 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 LRTM1Q9HBL6 345 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 TMEM242Q9NWH2 141 aa1.84□□□□□ -2.11
USH2A-203ENST00000463147 DSPPQ9NZW4 1301 aa1.84□□□□□ -2.12
USH2A-203ENST00000463147 NRXN3Q9Y4C0 1643 aa1.84□□□□□ -2.12
USH2A-203ENST00000463147 MYO9BQ13459 2157 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 DOCK4Q8N1I0 1966 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 TRBV6-7A0A0A0MS04 114 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 H7BYZ3 331 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 J3QQQ9 107 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 CRYGAP11844 174 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 CMPK1P30085 196 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 RNASE4P34096 147 aaKnown RBP1.83□□□□□ -2.12
USH2A-203ENST00000463147 GUCA1AP43080 201 aaPredicted RBP1.83□□□□□ -2.12
USH2A-203ENST00000463147 LTC4SQ16873 150 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 UNQ5815/PRO19632Q6UWF5 114 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 SIGLECL1Q8N7X8 197 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 C9orf163Q8N9P6 203 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 TMEM229BQ8NBD8 167 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 WFDC11Q8NEX6 87 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 TSTD1Q8NFU3 115 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 SKA2Q8WVK7 121 aaPredicted RBP1.83□□□□□ -2.12
USH2A-203ENST00000463147 SLAMF6Q96DU3 332 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 AP1S3Q96PC3 154 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 AQP10Q96PS8 301 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 PSMG3Q9BT73 122 aaPredicted RBP1.83□□□□□ -2.12
USH2A-203ENST00000463147 TTTY12Q9BZ98 90 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 NMES1Q9C002 83 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 SPANXA1Q9NS26 97 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 GLI3P10071 1580 aa1.83□□□□□ -2.12
USH2A-203ENST00000463147 KIAA2026Q5HYC2 2103 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 IFITM5A6NNB3 132 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 TAX1BP3O14907 124 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms