RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MLXQ9UH92 298 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 A0A087WWC5 75 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 TRAV8-1A0A0A6YYK1 113 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 TRBV6-1A0A0K0K1D8 114 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 SMIM1B2RUZ4 78 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 K7EN84 100 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 DNASE2O00115 360 aaPredicted RBP5.44□□□□□ -1.54
UBE4B-204ENST00000462658 SOCS3O14543 225 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 OVOL1O14753 267 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 IGLV2-8P01709 118 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 AMBPP02760 352 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 MT-ND4LP03901 98 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 PRB4P10163 310 aaPredicted RBP5.44□□□□□ -1.54
UBE4B-204ENST00000462658 MGST1P10620 155 aaKnown RBP5.44□□□□□ -1.54
UBE4B-204ENST00000462658 ID1P41134 155 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 PRNTQ86SH4 94 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 TMEM75Q8N9X5 138 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 ISOC2Q96AB3 205 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 MRPL53Q96EL3 112 aaKnown RBP5.44□□□□□ -1.54
UBE4B-204ENST00000462658 MS4A6AQ9H2W1 248 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 PSG8Q9UQ74 426 aa5.44□□□□□ -1.54
UBE4B-204ENST00000462658 FBN3Q75N90 2809 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 IGKV2-40A0A087WW87 121 aaPredicted RBP5.43□□□□□ -1.54
UBE4B-204ENST00000462658 FBLL1A6NHQ2 334 aaKnown RBP5.43□□□□□ -1.54
UBE4B-204ENST00000462658 GCGP01275 180 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 LTAP01374 205 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 IGKV2D-40P01614 121 aaPredicted RBP5.43□□□□□ -1.54
UBE4B-204ENST00000462658 CFC1BP0CG36 223 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 CFC1P0CG37 223 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 TFPI2P48307 235 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 PAFAH1B2P68402 229 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 FLI1Q01543 452 aaPredicted RBP5.43□□□□□ -1.54
UBE4B-204ENST00000462658 OR5I1Q13606 314 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 RNF212Q495C1 297 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 SAMD13Q5VXD3 122 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 CBLN2Q8IUK8 224 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 LINC00469Q8N7U9 141 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 NHLRC2Q8NBF2 726 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 ZNF738Q8NE65 137 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 DYNLRB2Q8TF09 96 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 DCANP1Q8TF63 244 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 SMIM12Q96EX1 92 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 SMCO4Q9NRQ5 59 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 ZFP30Q9Y2G7 519 aa5.43□□□□□ -1.54
UBE4B-204ENST00000462658 RBAKDNA6NC62 111 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 H7BYZ3 331 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 K7EQG2 157 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 PPP1R2P9O14990 202 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 ERCC8Q13216 396 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 DEFB114Q30KQ6 69 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 GFI1BQ5VTD9 330 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 RBPMS2Q6ZRY4 209 aaKnown RBP5.42□□□□□ -1.54
UBE4B-204ENST00000462658 Q86TA4 180 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 TMEM183AQ8IXX5 376 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 OR10G8Q8NGN5 311 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 SFRP2Q96HF1 295 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 CITED1Q99966 193 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 VGLL1Q99990 258 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 TUBA4BQ9H853 241 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 BIN3Q9NQY0 253 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 TMEM242Q9NWH2 141 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 SIGLEC8Q9NYZ4 499 aa5.42□□□□□ -1.54
UBE4B-204ENST00000462658 TRAV25A0A0B4J276 109 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 SNRPD3P62318 126 aaKnown RBP5.41□□□□□ -1.54
UBE4B-204ENST00000462658 SAPCD1Q5SSQ6 148 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 TMEM78Q5T7P6 136 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 PRR27Q6MZM9 219 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 C15orf54Q8N8G6 183 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 OR10J6PQ8NGY7 276 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 ASCL2Q99929 193 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 AGPAT4-IT1Q9H0P7 198 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 RNASE7Q9H1E1 156 aaKnown RBP5.41□□□□□ -1.54
UBE4B-204ENST00000462658 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 DNAH9Q9NYC9 4486 aa5.41□□□□□ -1.54
UBE4B-204ENST00000462658 TRAV2A0A0B4J234 112 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 GATCO43716 136 aaKnown RBP5.4□□□□□ -1.54
UBE4B-204ENST00000462658 SAP30O75446 220 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 ZNF688P0C7X2 276 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 ZNF705DP0CH99 300 aaPredicted RBP5.4□□□□□ -1.54
UBE4B-204ENST00000462658 ZNF705BP0CI00 300 aaPredicted RBP5.4□□□□□ -1.54
UBE4B-204ENST00000462658 ZNF138P52744 262 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 S100A12P80511 92 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 PSMG4Q5JS54 123 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 IBA57Q5T440 356 aaKnown RBP5.4□□□□□ -1.54
UBE4B-204ENST00000462658 FAM231DQ6ZW35 169 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 TMEM61Q8N0U2 210 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 FAM24BQ8N5W8 94 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.4□□□□□ -1.54
UBE4B-204ENST00000462658 OR8A1Q8NGG7 326 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 Q8TAT8 98 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 LINC00477Q96M19 166 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 NDFIP1Q9BT67 221 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 SCRT2Q9NQ03 307 aa5.4□□□□□ -1.54
UBE4B-204ENST00000462658 PKD1L1Q8TDX9 2849 aa5.4□□□□□ -1.55
UBE4B-204ENST00000462658 NBEAL1Q6ZS30 2694 aa5.4□□□□□ -1.55
UBE4B-204ENST00000462658 C19orf71A6NCJ1 209 aa5.39□□□□□ -1.55
UBE4B-204ENST00000462658 OR4C46A6NHA9 309 aa5.39□□□□□ -1.55
UBE4B-204ENST00000462658 COLCA2A8K830 154 aa5.39□□□□□ -1.55
UBE4B-204ENST00000462658 ZNF705GA8MUZ8 300 aaPredicted RBP5.39□□□□□ -1.55
UBE4B-204ENST00000462658 F6UB75 175 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms