RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 AJUBAQ96IF1 538 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 C11orf21Q9P2W6 132 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 CUL9Q8IWT3 2517 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 TRAV4A0A0B4J268 109 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 TRBV7-9A0A0J9YWB2 115 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 M0R381 172 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 SCGB2A1O75556 95 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 MFAP4P55083 255 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 TMEM155Q4W5P6 130 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 OR11H6Q8NGC7 330 aa6.23□□□□□ -1.41
ERCC8-204ENST00000462279 TIMM23O14925 209 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 THBDP07204 575 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 ARRDC1-AS1Q9H2J1 176 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 COL6A6A6NMZ7 2263 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 LINC01546A6NGU7 62 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 BUB1B-PAK6H3BSN5 160 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 CRLF1O75462 422 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 GAGE7O76087 117 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 NHLRC4P0CG21 123 aaPredicted RBP6.22□□□□□ -1.41
ERCC8-204ENST00000462279 GAGE12FP0CL80 117 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 GAGE12GP0CL81 117 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 GAGE12IP0CL82 117 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 UBE2D1P51668 147 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 GAGE4Q13068 117 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 TRPT1Q86TN4 253 aaKnown RBP6.22□□□□□ -1.41
ERCC8-204ENST00000462279 NDUFA11Q86Y39 141 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 C3orf56Q8N813 242 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 BEX4Q9NWD9 120 aaPredicted RBP6.22□□□□□ -1.41
ERCC8-204ENST00000462279 TMEM262E9PQX1 116 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 LYNX1G3V0Z9 82 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 IGHG4P01861 327 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 LYNX1P0DP58 116 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 CRIP2P52943 208 aaPredicted RBP6.22□□□□□ -1.41
ERCC8-204ENST00000462279 UBE2D3P61077 147 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 UBE2D2P62837 147 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 SMIM2Q9BVW6 85 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 CNFNQ9BYD5 112 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 RAB1BQ9H0U4 201 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 DYNLRB1Q9NP97 96 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 C21orf62Q9NYP8 219 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 SMAD5-AS1Q9Y6J3 95 aa6.22□□□□□ -1.41
ERCC8-204ENST00000462279 TRAV17A0A0B4J275 112 aa6.21□□□□□ -1.41
ERCC8-204ENST00000462279 SLC25A20O43772 301 aa6.21□□□□□ -1.41
ERCC8-204ENST00000462279 MGPP08493 103 aa6.21□□□□□ -1.41
ERCC8-204ENST00000462279 DLX6P56179 175 aa6.21□□□□□ -1.41
ERCC8-204ENST00000462279 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.41
ERCC8-204ENST00000462279 ADIPOQQ15848 244 aa6.21□□□□□ -1.41
ERCC8-204ENST00000462279 C2orf66Q6UXQ4 117 aa6.21□□□□□ -1.41
ERCC8-204ENST00000462279 TDHQ8IZJ6 230 aa6.21□□□□□ -1.41
ERCC8-204ENST00000462279 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.41
ERCC8-204ENST00000462279 CD7P09564 240 aa6.21□□□□□ -1.42
ERCC8-204ENST00000462279 Q1RN00 199 aa6.21□□□□□ -1.42
ERCC8-204ENST00000462279 Q6ZS46 218 aa6.21□□□□□ -1.42
ERCC8-204ENST00000462279 RASL10AQ92737 203 aa6.21□□□□□ -1.42
ERCC8-204ENST00000462279 RPL32P62910 135 aaKnown RBP6.21□□□□□ -1.42
ERCC8-204ENST00000462279 Q6ZS92 163 aa6.21□□□□□ -1.42
ERCC8-204ENST00000462279 NTN5Q8WTR8 489 aaPredicted RBP6.21□□□□□ -1.42
ERCC8-204ENST00000462279 VCX2Q9H322 139 aa6.21□□□□□ -1.42
ERCC8-204ENST00000462279 DCHS2Q6V1P9 2916 aa6.21□□□□□ -1.42
ERCC8-204ENST00000462279 RIF1Q5UIP0 2472 aaKnown RBP6.2□□□□□ -1.42
ERCC8-204ENST00000462279 CREBBPQ92793 2442 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 IGLV1-47P01700 117 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 CFC1BP0CG36 223 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 CFC1P0CG37 223 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 PTPRZ1P23471 2315 aaPredicted RBP6.2□□□□□ -1.42
ERCC8-204ENST00000462279 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 BAALCQ8WXS3 180 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 ANKRD11Q6UB99 2663 aaPredicted RBP6.2□□□□□ -1.42
ERCC8-204ENST00000462279 BSNQ9UPA5 3926 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 ANKHD1Q8IWZ3 2542 aaKnown RBP6.2□□□□□ -1.42
ERCC8-204ENST00000462279 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
ERCC8-204ENST00000462279 FAM159AQ6UWV7 190 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
ERCC8-204ENST00000462279 C8orf31Q8N9H6 132 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 AGPAT4-IT1Q9H0P7 198 aa6.2□□□□□ -1.42
ERCC8-204ENST00000462279 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 IGHV4-39P01824 125 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 IFITM1P13164 125 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 S100A4P26447 101 aaKnown RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 BSPH1Q075Z2 132 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 ORMDL2Q53FV1 153 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 FANCD2OSQ96PS1 177 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 MBD3L4A6NDZ8 208 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 MBD3L3A6NE82 208 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 MBD3L5A6NJ08 208 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 RHODO00212 210 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 TNFRSF13BO14836 293 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 COX8CQ7Z4L0 72 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 MBD3L2Q8NHZ7 208 aaPredicted RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 CITED1Q99966 193 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 PRO1854Q9UHT4 67 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 SPTAN1Q13813 2472 aaKnown RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 C11orf86A6NJI1 115 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 LINC01619G3V211 115 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 NBR2O15453 112 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 DUSP14O95147 198 aaKnown RBP6.19□□□□□ -1.42
ERCC8-204ENST00000462279 ASCL5Q7RTU5 278 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms