RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 H7C1H1 209 aa14.07□□□□□ -0.16
HPS3-204ENST00000462030 C1orf122Q6ZSJ8 110 aa14.07□□□□□ -0.16
HPS3-204ENST00000462030 METTL26Q96S19 204 aa14.07□□□□□ -0.16
HPS3-204ENST00000462030 ETDBQ3ZM63 59 aa14.07□□□□□ -0.16
HPS3-204ENST00000462030 C11orf71Q6IPW1 123 aa14.07□□□□□ -0.16
HPS3-204ENST00000462030 SPTA1P02549 2419 aa14.07□□□□□ -0.16
HPS3-204ENST00000462030 TRAV12-1A0A0B4J245 112 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 RRN3P1Q2M238 152 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 MRPL53Q96EL3 112 aaKnown RBP14.06□□□□□ -0.16
HPS3-204ENST00000462030 CHTOPQ9Y3Y2 248 aaKnown RBP14.06□□□□□ -0.16
HPS3-204ENST00000462030 OR11H12B2RN74 326 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 SMAGPQ0VAQ4 97 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 LCNL1Q6ZST4 164 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 OR11H1Q8NG94 326 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 OR11H2Q8NH07 326 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 MRAP2Q96G30 205 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 AJUBAQ96IF1 538 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 SIRPDQ9H106 197 aa14.06□□□□□ -0.16
HPS3-204ENST00000462030 MYMXA0A1B0GTQ4 84 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 M0R381 172 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 FBXL19-AS1Q494R0 122 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 RPL39LQ96EH5 51 aaKnown RBP14.05□□□□□ -0.16
HPS3-204ENST00000462030 SCGB3A1Q96QR1 104 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 NBASA2RRP1 2371 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 KLK9Q2XQG4 91 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 RASL10AQ92737 203 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 C16orf92Q96LL3 132 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 C20orf173Q96LM9 149 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 HIF1ANQ9NWT6 349 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 KLK9Q9UKQ9 250 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 CYSLTR1Q9Y271 337 aa14.05□□□□□ -0.16
HPS3-204ENST00000462030 GAGE12HA6NDE8 117 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 EEF1AKMT3Q96AZ1 226 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 SIGMAR1Q99720 223 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 SPAG8Q99932 426 aaPredicted RBP14.04□□□□□ -0.16
HPS3-204ENST00000462030 ZFHX3Q15911 3703 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 CCL21O00585 134 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 SUMO2P61956 95 aaKnown RBP14.04□□□□□ -0.16
HPS3-204ENST00000462030 CD300EQ496F6 205 aaPredicted RBP14.04□□□□□ -0.16
HPS3-204ENST00000462030 NEXN-AS1Q8NBZ9 246 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 TOMM6Q96B49 74 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 PRO0461Q9UI25 63 aa14.04□□□□□ -0.16
HPS3-204ENST00000462030 U3KQE9 123 aa14.03□□□□□ -0.16
HPS3-204ENST00000462030 A0A1B0GWB2 263 aa14.03□□□□□ -0.16
HPS3-204ENST00000462030 LGALS1P09382 135 aaKnown RBP14.03□□□□□ -0.16
HPS3-204ENST00000462030 GAGE13Q4V321 117 aa14.03□□□□□ -0.16
HPS3-204ENST00000462030 ORMDL2Q53FV1 153 aa14.03□□□□□ -0.16
HPS3-204ENST00000462030 DEFB1P60022 68 aa14.02□□□□□ -0.16
HPS3-204ENST00000462030 MORN3Q6PF18 240 aaPredicted RBP14.02□□□□□ -0.16
HPS3-204ENST00000462030 SAA4P35542 130 aa14.02□□□□□ -0.17
HPS3-204ENST00000462030 INSL3P51460 131 aa14.02□□□□□ -0.17
HPS3-204ENST00000462030 C14orf178Q8N769 122 aaPredicted RBP14.02□□□□□ -0.17
HPS3-204ENST00000462030 RNF223E7ERA6 249 aa14.01□□□□□ -0.17
HPS3-204ENST00000462030 LINC01619G3V211 115 aa14.01□□□□□ -0.17
HPS3-204ENST00000462030 BAALCQ8WXS3 180 aa14.01□□□□□ -0.17
HPS3-204ENST00000462030 TRBV7-1A0A0A6YYK4 115 aa14.01□□□□□ -0.17
HPS3-204ENST00000462030 RAXQ9Y2V3 346 aa14.01□□□□□ -0.17
HPS3-204ENST00000462030 PTPRQQ9UMZ3 2332 aa14.01□□□□□ -0.17
HPS3-204ENST00000462030 J3QR89 54 aa14□□□□□ -0.17
HPS3-204ENST00000462030 C2orf66Q6UXQ4 117 aa14□□□□□ -0.17
HPS3-204ENST00000462030 ZFAND2AQ8N6M9 145 aa14□□□□□ -0.17
HPS3-204ENST00000462030 ITLN2Q8WWU7 325 aaPredicted RBP14□□□□□ -0.17
HPS3-204ENST00000462030 PRADC1Q9BSG0 188 aa14□□□□□ -0.17
HPS3-204ENST00000462030 MGPP08493 103 aa14□□□□□ -0.17
HPS3-204ENST00000462030 SLC25A16P16260 332 aa14□□□□□ -0.17
HPS3-204ENST00000462030 GLMPQ8WWB7 406 aa14□□□□□ -0.17
HPS3-204ENST00000462030 LINC00527Q9UJ94 153 aa14□□□□□ -0.17
HPS3-204ENST00000462030 SPATA25Q9BR10 227 aa13.99□□□□□ -0.17
HPS3-204ENST00000462030 DPH3P1Q9H4G8 78 aa13.99□□□□□ -0.17
HPS3-204ENST00000462030 S100A4P26447 101 aaKnown RBP13.99□□□□□ -0.17
HPS3-204ENST00000462030 UBE2E1P51965 193 aa13.99□□□□□ -0.17
HPS3-204ENST00000462030 FOXC1Q12948 553 aa13.99□□□□□ -0.17
HPS3-204ENST00000462030 C20orf78Q9BR46 151 aa13.99□□□□□ -0.17
HPS3-204ENST00000462030 PGPEP1Q9NXJ5 209 aa13.99□□□□□ -0.17
HPS3-204ENST00000462030 HOXA3O43365 443 aaPredicted RBP13.98□□□□□ -0.17
HPS3-204ENST00000462030 ADORA2A-AS1P86434 159 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 ATP5G2Q06055 141 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 C9orf139Q6ZV77 190 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 GPHB5Q86YW7 130 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 PLEKHB2Q96CS7 222 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 CENPVL3A0A0U1RRI6 287 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 PRSS29PA6NIE9 313 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 SCGB1A1P11684 91 aa13.98□□□□□ -0.17
HPS3-204ENST00000462030 ZNF815PA8K554 130 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 CIDEAO60543 219 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 SCGB2A2Q13296 93 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 ANXA2RQ3ZCQ2 193 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 PHLDA3Q9Y5J5 127 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 K7ENP7 123 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 TMEM219Q86XT9 240 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 SPOCK3Q9BQ16 436 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 LENEPQ9Y5L5 61 aa13.97□□□□□ -0.17
HPS3-204ENST00000462030 SPTBN1Q01082 2364 aaKnown RBP13.96□□□□□ -0.17
HPS3-204ENST00000462030 ASIPP42127 132 aa13.96□□□□□ -0.17
HPS3-204ENST00000462030 UNQ9165/PRO28630Q6UXU0 137 aa13.96□□□□□ -0.17
HPS3-204ENST00000462030 C5orf56Q8N8D9 126 aa13.96□□□□□ -0.17
HPS3-204ENST00000462030 TRAV21A0A0B4J279 112 aa13.96□□□□□ -0.18
HPS3-204ENST00000462030 A0A1W2PPR1 153 aa13.96□□□□□ -0.18
HPS3-204ENST00000462030 MRPL16Q9NX20 251 aaKnown RBP13.96□□□□□ -0.18
HPS3-204ENST00000462030 TRBV12-3P01733 135 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms