RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 Q6YL49 198 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 OR4X2Q8NGF9 303 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 MAP1LC3AQ9H492 121 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 ZMAT4Q9H898 229 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 NXT2Q9NPJ8 142 aaKnown RBP9.51□□□□□ -0.89
COL4A6-204ENST00000461897 HECTD1Q9ULT8 2610 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 TLN2Q9Y4G6 2542 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 TRAV8-6A0A0B4J262 113 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 C7orf71A4D174 169 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 CBY3A6NI87 242 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 H3BRM9 83 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 HLA-DMBP28068 263 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
COL4A6-204ENST00000461897 VPREB3Q9UKI3 123 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 PRSS47A8MTI9 375 aa9.5□□□□□ -0.89
COL4A6-204ENST00000461897 SMKR1H3BMG3 65 aa9.5□□□□□ -0.89
COL4A6-204ENST00000461897 FCER1GP30273 86 aa9.5□□□□□ -0.89
COL4A6-204ENST00000461897 PCP4P48539 62 aa9.5□□□□□ -0.89
COL4A6-204ENST00000461897 KRTAP1-1Q07627 177 aa9.5□□□□□ -0.89
COL4A6-204ENST00000461897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.5□□□□□ -0.89
COL4A6-204ENST00000461897 ADAMTSL5Q6ZMM2 481 aa9.5□□□□□ -0.89
COL4A6-204ENST00000461897 FASNP49327 2511 aaKnown RBP9.49□□□□□ -0.89
COL4A6-204ENST00000461897 CLPSL1A2RUU4 121 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 A6NDN8 102 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 FAM223BA6NKX1 122 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 CLEC3BP05452 202 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 CFHR3Q02985 330 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 TMEM95Q3KNT9 176 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 IL17RELQ6ZVW7 336 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 FAM223AQ8IWN6 122 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 ATP6V0BQ99437 205 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 TRBV7-1A0A0A6YYK4 115 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 IGHV3-35A0A0C4DH35 117 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 C9orf118A6NHY6 69 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 BRI3O95415 125 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 TRGV3P03979 118 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 UFSP1Q6NVU6 142 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 CLEC19AQ6UXS0 136 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 MSRB1Q9NZV6 116 aa9.49□□□□□ -0.89
COL4A6-204ENST00000461897 IGLV2-18A0A075B6J9 118 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 PRAC2D3DTV9 90 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 H3BUA1 57 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-204ENST00000461897 TNFRSF6BO95407 300 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 ORM1P02763 201 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 ATP5G2Q06055 141 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 IGFL4Q6B9Z1 124 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 ZNF580Q9UK33 172 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 U3KQE9 123 aa9.48□□□□□ -0.89
COL4A6-204ENST00000461897 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 SNAI2O43623 268 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 HLA-DRB4P13762 266 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 ERCC8Q13216 396 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 ODF1Q14990 250 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 OCIAD2Q56VL3 154 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 ERASQ7Z444 233 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 KLK15Q9H2R5 256 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 HLA-DRB4X5D2U9 266 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 CUBNO60494 3623 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 IGHV3OR16-8A0A075B7F1 116 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 Q8N8P6 123 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 DKK2Q9UBU2 259 aa9.47□□□□□ -0.89
COL4A6-204ENST00000461897 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.9
COL4A6-204ENST00000461897 EVI2AP22794 236 aa9.46□□□□□ -0.9
COL4A6-204ENST00000461897 FXYD7P58549 80 aa9.46□□□□□ -0.9
COL4A6-204ENST00000461897 C9orf47Q6ZRZ4 202 aa9.46□□□□□ -0.9
COL4A6-204ENST00000461897 LCNL1Q6ZST4 164 aa9.46□□□□□ -0.9
COL4A6-204ENST00000461897 AGPAT4-IT1Q9H0P7 198 aa9.46□□□□□ -0.9
COL4A6-204ENST00000461897 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
COL4A6-204ENST00000461897 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.9
COL4A6-204ENST00000461897 GAGE12BA1L429 117 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 ATP5LO75964 103 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 PF4V1P10720 104 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 LEPP41159 167 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 GTF2H5Q6ZYL4 71 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 ACANP16112 2415 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 IGHV7-4-1A0A0J9YVY3 117 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 GAGE10A6NGK3 116 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 TRBV12-3P01733 135 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 PCP2Q8IVA1 136 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 ZNF702PQ9H963 129 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 C11orf21Q9P2W6 132 aa9.45□□□□□ -0.9
COL4A6-204ENST00000461897 C10orf99Q6UWK7 81 aa9.44□□□□□ -0.9
COL4A6-204ENST00000461897 RNF182Q8N6D2 247 aa9.44□□□□□ -0.9
COL4A6-204ENST00000461897 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
COL4A6-204ENST00000461897 DUX5Q96PT3 197 aa9.44□□□□□ -0.9
COL4A6-204ENST00000461897 LENEPQ9Y5L5 61 aa9.44□□□□□ -0.9
COL4A6-204ENST00000461897 K7EP34 96 aa9.43□□□□□ -0.9
COL4A6-204ENST00000461897 IGHV3-11P01762 117 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms