RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 MRPL16Q9NX20 251 aaKnown RBP6.19□□□□□ -1.42
LDB1-203ENST00000461873 PRO0255Q9UI72 69 aa6.19□□□□□ -1.42
LDB1-203ENST00000461873 HHLA3Q9XRX5 114 aa6.19□□□□□ -1.42
LDB1-203ENST00000461873 KLF12Q9Y4X4 402 aa6.19□□□□□ -1.42
LDB1-203ENST00000461873 TRAV21A0A0B4J279 112 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 SERTM2A0A1B0GWG4 89 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 A0A1W2PPQ1 181 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 C16orf90A8MZG2 172 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 SPINK4O60575 86 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 SRIP30626 198 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 CDC34P49427 236 aaPredicted RBP6.18□□□□□ -1.42
LDB1-203ENST00000461873 SERF2P84101 59 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 MRPL23Q16540 153 aaKnown RBP6.18□□□□□ -1.42
LDB1-203ENST00000461873 TMEM183BQ1AE95 376 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 GOLT1AQ6ZVE7 132 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 TMEM183AQ8IXX5 376 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 RAB24Q969Q5 203 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 KCNS1Q96KK3 526 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 FAM19A4Q96LR4 140 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 C18orf15Q96N68 181 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 SDF2L1Q9HCN8 221 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 TREM1Q9NP99 234 aa6.18□□□□□ -1.42
LDB1-203ENST00000461873 MRPS16Q9Y3D3 137 aaKnown RBP6.18□□□□□ -1.42
LDB1-203ENST00000461873 UMAD1C9J7I0 102 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 SIVA1O15304 175 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 BTF3P20290 206 aaKnown RBP6.17□□□□□ -1.42
LDB1-203ENST00000461873 BLOC1S1P78537 153 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 ESRGQ1W209 222 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 CLLU1Q5K131 121 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 ZFAND2AQ8N6M9 145 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 OR4C5Q8NGB2 326 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 SFT2D1Q8WV19 159 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 TXNDC17Q9BRA2 123 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 ACTR3CQ9C0K3 210 aaPredicted RBP6.17□□□□□ -1.42
LDB1-203ENST00000461873 TMEM167BQ9NRX6 74 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 TP53TG3Q9ULZ0 132 aa6.17□□□□□ -1.42
LDB1-203ENST00000461873 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 C9JCJ5 164 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 CXorf1O96002 111 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 ORM1P02763 201 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 PPT1P50897 306 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 RAB5CP51148 216 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 Q6AWC8 147 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 NEGR1Q7Z3B1 354 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 ARL6IP6Q8N6S5 226 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 HECTD4Q9Y4D8 3996 aa6.16□□□□□ -1.42
LDB1-203ENST00000461873 DNAH2Q9P225 4427 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 A0A096LPF7 62 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 CTXND1A0A1B0GTU2 59 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 MAP1LC3B2A6NCE7 125 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 FBLL1A6NHQ2 334 aaKnown RBP6.15□□□□□ -1.42
LDB1-203ENST00000461873 M0R2P5 195 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 ARL14EPLP0DKL9 152 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 EVI2AP22794 236 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
LDB1-203ENST00000461873 TNP2Q05952 138 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 PRR9Q5T870 116 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 SH2D6Q7Z4S9 175 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 NFE4Q86UQ8 179 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 C5orf17Q8NAS9 161 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 NHLRC2Q8NBF2 726 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 MBD3L1Q8WWY6 194 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 MAP1LC3BQ9GZQ8 125 aa6.15□□□□□ -1.42
LDB1-203ENST00000461873 TRAV4A0A0B4J268 109 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 LINC00862A6NCI5 91 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 F6UZH7 168 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 NXPH4O95158 308 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 GYPEP15421 78 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 S100A4P26447 101 aaKnown RBP6.14□□□□□ -1.43
LDB1-203ENST00000461873 CRYBA4P53673 196 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 UBE2G2P60604 165 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
LDB1-203ENST00000461873 SMUG1Q53HV7 270 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 SAPCD1Q5SSQ6 148 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 COMMD7Q86VX2 200 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 RASL10AQ92737 203 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 VSIG2Q96IQ7 327 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 MDFICQ9P1T7 246 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 GNG13Q9P2W3 67 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 LY96Q9Y6Y9 160 aa6.14□□□□□ -1.43
LDB1-203ENST00000461873 MUC4Q99102 2169 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 CIDEAO60543 219 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 SFTA3P0C7M3 94 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 STAG3L2P0CL84 134 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 STAG3L3P0CL85 134 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 GCHFRP30047 84 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 ERVFC1-1P60608 527 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 SUMO1P63165 101 aaKnown RBP6.13□□□□□ -1.43
LDB1-203ENST00000461873 GNG5P63218 68 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 DPPA3Q6W0C5 159 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 SPATA12Q7Z6I5 190 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 PRNTQ86SH4 94 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 ZNF575Q86XF7 245 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 SGK494Q96LW2 274 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 PRADC1Q9BSG0 188 aa6.13□□□□□ -1.43
LDB1-203ENST00000461873 NKX6-2Q9C056 277 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms