RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MEIG1Q5JSS6 88 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 C1orf134Q5TEV5 83 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 SNX29P2Q8IUI4 249 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 TCTEX1D1Q8N7M0 179 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 MORN4Q8NDC4 146 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 OR4B1Q8NGF8 309 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 OR2T35Q8NGX2 323 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 POP5Q969H6 163 aaKnown RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 DIRC1Q969H9 104 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 CIB3Q96Q77 187 aaPredicted RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 SDF2Q99470 211 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 TCEAL7Q9BRU2 100 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 COA4Q9NYJ1 87 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 KLK9Q9UKQ9 250 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 LSM2Q9Y333 95 aaKnown RBP1□□□□□ -2.25
HDAC6-212ENST00000461608 DNAJC15Q9Y5T4 150 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 HLA-DRB4X5D2U9 266 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 BRWD1Q9NSI6 2320 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 PIK3C2BO00750 1634 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 LAMC1P11047 1609 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 MED12LQ86YW9 2145 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 UNC13BO14795 1591 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 ARHGEF5Q12774 1597 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 MAST1Q9Y2H9 1570 aa1□□□□□ -2.25
HDAC6-212ENST00000461608 EFCAB6Q5THR3 1501 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 FCGBPQ9Y6R7 5405 aaPredicted RBP0.99□□□□□ -2.25
HDAC6-212ENST00000461608 ERVK-7P63135 1459 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CCDC141Q6ZP82 1450 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 ARHGAP35Q9NRY4 1499 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 MBD5Q9P267 1494 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 BLMP54132 1417 aaPredicted RBP0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CASKIN1Q8WXD9 1431 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CCDC88AQ3V6T2 1871 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CCNB3Q8WWL7 1395 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 TMEM2Q9UHN6 1383 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 ALPK2Q86TB3 2170 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 RGPD1P0DJD0 1748 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 NALCNQ8IZF0 1738 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 BBIP1A8MTZ0 92 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 M0R233 179 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CORTO00230 105 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 UQCRQO14949 82 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 HCRTO43612 131 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 IGLV1-51P01701 117 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CD2P06729 351 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 AKAIN1P0CW23 69 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 LYNX1P0DP58 116 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 FABP4P15090 132 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 GUCA1AP43080 201 aaPredicted RBP0.99□□□□□ -2.25
HDAC6-212ENST00000461608 RBP2P50120 134 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 MRPS36P82909 103 aaKnown RBP0.99□□□□□ -2.25
HDAC6-212ENST00000461608 QRFPP83859 136 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CIRBPQ14011 172 aaKnown RBP0.99□□□□□ -2.25
HDAC6-212ENST00000461608 IZUMO2Q6UXV1 221 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 TMEM91Q6ZNR0 172 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 Q8N814 137 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CLEC2BQ92478 149 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 NABP2Q9BQ15 211 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 PDCD10Q9BUL8 212 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 CST11Q9H112 138 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 LY96Q9Y6Y9 160 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 DOCK4Q8N1I0 1966 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 ANAPC1Q9H1A4 1944 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 ASXL1Q8IXJ9 1541 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 SDK1Q7Z5N4 2213 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 BCL9LQ86UU0 1499 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 FYCO1Q9BQS8 1478 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 ECM29Q5VYK3 1845 aa0.99□□□□□ -2.25
HDAC6-212ENST00000461608 RP1P56715 2156 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 XRN1Q8IZH2 1706 aaKnown RBP0.98□□□□□ -2.25
HDAC6-212ENST00000461608 NWD2Q9ULI1 1742 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 RTL9Q8NET4 1388 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 GCC2Q8IWJ2 1684 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 TMEM131LA2VDJ0 1609 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 PTPN23Q9H3S7 1636 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 PLXND1Q9Y4D7 1925 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 C5orf67F2Z3F1 127 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 M0R2N4 97 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 CDC42EP2O14613 210 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 GEMIN2O14893 280 aaKnown RBP0.98□□□□□ -2.25
HDAC6-212ENST00000461608 CD3DP04234 171 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 SMIM6P0DI80 62 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 PRB4P10163 310 aaPredicted RBP0.98□□□□□ -2.25
HDAC6-212ENST00000461608 ROMO1P60602 79 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 PLGLB1Q02325 96 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 DEFB113Q30KQ7 82 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 C1orf137Q5JT78 98 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 MIC13Q5XKP0 118 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 TEN1Q86WV5 123 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 CLECL1Q8IZS7 167 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 C10orf111Q8N326 155 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 C15orf53Q8NAA6 179 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 LINC00301Q8NCQ3 95 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 TMEM254Q8TBM7 123 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 MAGOHBQ96A72 148 aaKnown RBP0.98□□□□□ -2.25
HDAC6-212ENST00000461608 RAB37Q96AX2 223 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 DPH3Q96FX2 82 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 OR4C12Q96R67 309 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 SEC11CQ9BY50 192 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms