RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TMUB2Q71RG4 321 aa10.75□□□□□ -0.69
VARS-219ENST00000461328 NKX6-2Q9C056 277 aaPredicted RBP10.75□□□□□ -0.69
VARS-219ENST00000461328 TRAV34A0A0B4J273 112 aa10.74□□□□□ -0.69
VARS-219ENST00000461328 A0A1B0GV50 99 aa10.74□□□□□ -0.69
VARS-219ENST00000461328 TPT1P13693 172 aaKnown RBP10.74□□□□□ -0.69
VARS-219ENST00000461328 CST9LP1Q5W188 147 aa10.74□□□□□ -0.69
VARS-219ENST00000461328 KCNS1Q96KK3 526 aa10.74□□□□□ -0.69
VARS-219ENST00000461328 C18orf15Q96N68 181 aa10.74□□□□□ -0.69
VARS-219ENST00000461328 SPXQ9BT56 116 aa10.74□□□□□ -0.69
VARS-219ENST00000461328 GNRH2O43555 120 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 IGLV2-11P01706 119 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 TYMSP04818 313 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 TDRG1Q3Y452 100 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 SAPCD1Q5SSQ6 148 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 Q6ZR54 194 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 SFT2D1Q8WV19 159 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 HIST1H2BAQ96A08 127 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 LINC00479Q96M42 142 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 ARL2-SNX15V9GYD0 113 aa10.73□□□□□ -0.69
VARS-219ENST00000461328 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 PRSS29PA6NIE9 313 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 RTL8CO15255 209 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
VARS-219ENST00000461328 SOHLH1Q5JUK2 328 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 DPPA3Q6W0C5 159 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 Q86TA4 180 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 TCTE3Q8IZS6 198 aa10.72□□□□□ -0.69
VARS-219ENST00000461328 TRGV4A0A0C4DH28 118 aa10.71□□□□□ -0.69
VARS-219ENST00000461328 NACAE9PAV3 2078 aa10.71□□□□□ -0.69
VARS-219ENST00000461328 H3BNG1 76 aa10.71□□□□□ -0.69
VARS-219ENST00000461328 PAX4O43316 350 aa10.71□□□□□ -0.69
VARS-219ENST00000461328 ZNF80P51504 273 aaPredicted RBP10.71□□□□□ -0.69
VARS-219ENST00000461328 UBE2G1P62253 170 aa10.71□□□□□ -0.69
VARS-219ENST00000461328 Q6ZNX1 250 aa10.71□□□□□ -0.69
VARS-219ENST00000461328 M0R2P5 195 aa10.7□□□□□ -0.7
VARS-219ENST00000461328 H2AFB1P0C5Y9 115 aa10.7□□□□□ -0.7
VARS-219ENST00000461328 AKR1C3P42330 323 aa10.7□□□□□ -0.7
VARS-219ENST00000461328 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
VARS-219ENST00000461328 LINC00588Q9Y4M8 146 aa10.7□□□□□ -0.7
VARS-219ENST00000461328 PAGE4O60829 102 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 SFTA3P0C7M3 94 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 SLAQ13239 276 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 C1orf134Q5TEV5 83 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 EIF5AL1Q6IS14 154 aaKnown RBP10.69□□□□□ -0.7
VARS-219ENST00000461328 AKAP14Q86UN6 197 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 RASL10AQ92737 203 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 VSIG2Q96IQ7 327 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 TCEAL7Q9BRU2 100 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 ICOSQ9Y6W8 199 aa10.69□□□□□ -0.7
VARS-219ENST00000461328 C9JCJ5 164 aa10.68□□□□□ -0.7
VARS-219ENST00000461328 C1QBP02746 253 aa10.68□□□□□ -0.7
VARS-219ENST00000461328 OR4C5Q8NGB2 326 aa10.68□□□□□ -0.7
VARS-219ENST00000461328 PCNPQ8WW12 178 aaKnown RBP10.68□□□□□ -0.7
VARS-219ENST00000461328 C11orf21Q9P2W6 132 aa10.68□□□□□ -0.7
VARS-219ENST00000461328 HHLA3Q9XRX5 114 aa10.68□□□□□ -0.7
VARS-219ENST00000461328 A0A096LPF7 62 aa10.67□□□□□ -0.7
VARS-219ENST00000461328 TRAV4A0A0B4J268 109 aa10.67□□□□□ -0.7
VARS-219ENST00000461328 NBDYA0A0U1RRE5 68 aa10.67□□□□□ -0.7
VARS-219ENST00000461328 A0A1B0GVY2 172 aa10.67□□□□□ -0.7
VARS-219ENST00000461328 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
VARS-219ENST00000461328 FHL2Q14192 279 aa10.67□□□□□ -0.7
VARS-219ENST00000461328 LGALSLQ3ZCW2 172 aaPredicted RBP10.67□□□□□ -0.7
VARS-219ENST00000461328 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
VARS-219ENST00000461328 HECTD4Q9Y4D8 3996 aa10.67□□□□□ -0.7
VARS-219ENST00000461328 FABP5P3A8MUU1 101 aa10.66□□□□□ -0.7
VARS-219ENST00000461328 RAB5CP51148 216 aa10.66□□□□□ -0.7
VARS-219ENST00000461328 CRYBA4P53673 196 aa10.66□□□□□ -0.7
VARS-219ENST00000461328 ZFP30Q9Y2G7 519 aa10.66□□□□□ -0.7
VARS-219ENST00000461328 MUC4Q99102 2169 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 TEX46H3BTG2 121 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 ORM1P02763 201 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 ASIPP42127 132 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 ESRGQ1W209 222 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 ZNF876PQ49A33 203 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 ZC2HC1AQ96GY0 325 aa10.65□□□□□ -0.7
VARS-219ENST00000461328 MRPS16Q9Y3D3 137 aaKnown RBP10.65□□□□□ -0.7
VARS-219ENST00000461328 B4DEV8 164 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 M0R036 132 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
VARS-219ENST00000461328 FAM162BQ5T6X4 162 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 SLC51BQ86UW2 128 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 C9orf85Q96MD7 179 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 Q9H8V8 135 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 MANBALQ9NQG1 85 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 GNG13Q9P2W3 67 aa10.64□□□□□ -0.71
VARS-219ENST00000461328 SH2D1AO60880 128 aa10.63□□□□□ -0.71
VARS-219ENST00000461328 LTAP01374 205 aa10.63□□□□□ -0.71
VARS-219ENST00000461328 GYPEP15421 78 aa10.63□□□□□ -0.71
VARS-219ENST00000461328 SRIP30626 198 aa10.63□□□□□ -0.71
VARS-219ENST00000461328 C6orf223Q8N319 242 aa10.63□□□□□ -0.71
VARS-219ENST00000461328 NHLRC2Q8NBF2 726 aa10.63□□□□□ -0.71
VARS-219ENST00000461328 DNAH2Q9P225 4427 aa10.63□□□□□ -0.71
VARS-219ENST00000461328 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
VARS-219ENST00000461328 TRBV6-1A0A0K0K1D8 114 aa10.62□□□□□ -0.71
VARS-219ENST00000461328 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms