RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 NIT1Q86X76 327 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 DEFB125Q8N687 156 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 SCRT2Q9NQ03 307 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 AGRNO00468 2067 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 HECTD1Q9ULT8 2610 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 F6UB75 175 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 ZNF705DP0CH99 300 aaPredicted RBP8.11□□□□□ -1.11
IFT88-204ENST00000461115 ZNF705BP0CI00 300 aaPredicted RBP8.11□□□□□ -1.11
IFT88-204ENST00000461115 SRD5A1P18405 259 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 PMCHP20382 165 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 CACNG7P62955 275 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 TDRG1Q3Y452 100 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 FOXI2Q6ZQN5 318 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 DPF1Q92782 380 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 JMJD8Q96S16 334 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 GSN-AS1Q9NRJ2 163 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
IFT88-204ENST00000461115 PPBPP02775 128 aa8.1□□□□□ -1.11
IFT88-204ENST00000461115 FOSL1P15407 271 aa8.1□□□□□ -1.11
IFT88-204ENST00000461115 RAB4AP20338 218 aa8.1□□□□□ -1.11
IFT88-204ENST00000461115 DEFB1P60022 68 aa8.1□□□□□ -1.11
IFT88-204ENST00000461115 DEFB136Q30KP8 78 aa8.1□□□□□ -1.11
IFT88-204ENST00000461115 MRPL51Q4U2R6 128 aaKnown RBP8.1□□□□□ -1.11
IFT88-204ENST00000461115 KLHL30-AS1Q8NEE0 82 aa8.1□□□□□ -1.11
IFT88-204ENST00000461115 DLX4Q92988 240 aaPredicted RBP8.1□□□□□ -1.11
IFT88-204ENST00000461115 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
IFT88-204ENST00000461115 TRAV25A0A0B4J276 109 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 LINC01546A6NGU7 62 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 PRSS47A8MTI9 375 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 DUSP14O95147 198 aaKnown RBP8.09□□□□□ -1.11
IFT88-204ENST00000461115 NXPH4O95158 308 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 LY6G6DO95868 133 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 LEPP41159 167 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 AMTP48728 403 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 TWIST1Q15672 202 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 DEFB114Q30KQ6 69 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 AMTNQ6UX39 209 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 Q6ZQT7 251 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 ORMDL3Q8N138 153 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 Q8N976 141 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 RAX2Q96IS3 184 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 TPPP3Q9BW30 176 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 SAMD10Q9BYL1 202 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 TSSC4Q9Y5U2 329 aaPredicted RBP8.09□□□□□ -1.11
IFT88-204ENST00000461115 MUC4Q99102 2169 aa8.09□□□□□ -1.11
IFT88-204ENST00000461115 IGKV3-7A0A075B6H7 116 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 HSBP1O75506 76 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 ZNF688P0C7X2 276 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 LINC00614P0C842 121 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 PROK1P58294 105 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 PSMG4Q5JS54 123 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 MSRB1Q9NZV6 116 aa8.08□□□□□ -1.12
IFT88-204ENST00000461115 CD28P10747 220 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 ANXA2RQ3ZCQ2 193 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 EBLN2Q6P2I7 272 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 TEX43Q6ZNM6 134 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 POM121L12Q8N7R1 296 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 OR10AG1Q8NH19 301 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 PRELID3AQ96N28 172 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 SPAG8Q99932 426 aaPredicted RBP8.07□□□□□ -1.12
IFT88-204ENST00000461115 NAGKQ9UJ70 344 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 NOTCH2Q04721 2471 aa8.07□□□□□ -1.12
IFT88-204ENST00000461115 NF1P21359 2839 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 C7orf71A4D174 169 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 D6R8Y8 96 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 CCL24O00175 119 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
IFT88-204ENST00000461115 RNASE3P12724 160 aaKnown RBP8.06□□□□□ -1.12
IFT88-204ENST00000461115 HLA-DRB4P13762 266 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 TSPOP30536 169 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 ASIPP42127 132 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 KIR3DS1Q14943 382 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 WFDC3Q8IUB2 231 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 TMEM61Q8N0U2 210 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 HLA-DRB4X5D2U9 266 aa8.06□□□□□ -1.12
IFT88-204ENST00000461115 RNASE4P34096 147 aaKnown RBP8.05□□□□□ -1.12
IFT88-204ENST00000461115 CDKN1BP46527 198 aa8.05□□□□□ -1.12
IFT88-204ENST00000461115 PKIAP61925 76 aa8.05□□□□□ -1.12
IFT88-204ENST00000461115 RNASEKQ6P5S7 137 aaKnown RBP8.05□□□□□ -1.12
IFT88-204ENST00000461115 FAM19A2Q8N3H0 131 aa8.05□□□□□ -1.12
IFT88-204ENST00000461115 SMR3AQ99954 134 aa8.05□□□□□ -1.12
IFT88-204ENST00000461115 CITED2Q99967 270 aaPredicted RBP8.05□□□□□ -1.12
IFT88-204ENST00000461115 ZNF256Q9Y2P7 627 aaPredicted RBP8.05□□□□□ -1.12
IFT88-204ENST00000461115 WNK1Q9H4A3 2382 aa8.05□□□□□ -1.12
IFT88-204ENST00000461115 IGHV1-24A0A0C4DH33 117 aa8.04□□□□□ -1.12
IFT88-204ENST00000461115 H3BMM0 161 aa8.04□□□□□ -1.12
IFT88-204ENST00000461115 H3BVH4 76 aa8.04□□□□□ -1.12
IFT88-204ENST00000461115 TCF21O43680 179 aa8.04□□□□□ -1.12
IFT88-204ENST00000461115 C3orf79P0CE67 100 aa8.04□□□□□ -1.12
IFT88-204ENST00000461115 PRR31Q5SQ13 230 aa8.04□□□□□ -1.12
IFT88-204ENST00000461115 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
IFT88-204ENST00000461115 MUC21A0A0G2JKD1 596 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 KIR2DL5BA0A0G2JN68 375 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 KIR2DL5BA0A0G2JPC4 375 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 MUC21A0A140T8X8 626 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms