RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 LINC00612Q8N6U2 182 aa13.03□□□□□ -0.32
DDR1-241ENST00000460944 LINC00476Q8WZB0 136 aa13.03□□□□□ -0.32
DDR1-241ENST00000460944 APLNQ9ULZ1 77 aa13.03□□□□□ -0.32
DDR1-241ENST00000460944 ZFP30Q9Y2G7 519 aa13.03□□□□□ -0.32
DDR1-241ENST00000460944 KLF12Q9Y4X4 402 aa13.03□□□□□ -0.32
DDR1-241ENST00000460944 SACSQ9NZJ4 4579 aa13.02□□□□□ -0.32
DDR1-241ENST00000460944 SCO2A0A1W2PP80 73 aa13.02□□□□□ -0.33
DDR1-241ENST00000460944 F5H768 121 aa13.02□□□□□ -0.33
DDR1-241ENST00000460944 S100A9P06702 114 aaKnown RBP13.02□□□□□ -0.33
DDR1-241ENST00000460944 ZNF80P51504 273 aaPredicted RBP13.02□□□□□ -0.33
DDR1-241ENST00000460944 Q6ZTI0 123 aa13.02□□□□□ -0.33
DDR1-241ENST00000460944 TXNDC17Q9BRA2 123 aa13.02□□□□□ -0.33
DDR1-241ENST00000460944 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
DDR1-241ENST00000460944 TRGV2A0A075B6R0 118 aa13.01□□□□□ -0.33
DDR1-241ENST00000460944 TRBV6-1A0A0K0K1D8 114 aa13.01□□□□□ -0.33
DDR1-241ENST00000460944 LY6G6CO95867 125 aa13.01□□□□□ -0.33
DDR1-241ENST00000460944 BLOC1S1P78537 153 aa13.01□□□□□ -0.33
DDR1-241ENST00000460944 SPINK4O60575 86 aa13□□□□□ -0.33
DDR1-241ENST00000460944 SPXQ9BT56 116 aa13□□□□□ -0.33
DDR1-241ENST00000460944 MDFICQ9P1T7 246 aa13□□□□□ -0.33
DDR1-241ENST00000460944 RYR2Q92736 4967 aa13□□□□□ -0.33
DDR1-241ENST00000460944 MUC4Q99102 2169 aa13□□□□□ -0.33
DDR1-241ENST00000460944 FABP5P3A8MUU1 101 aa12.99□□□□□ -0.33
DDR1-241ENST00000460944 LTAP01374 205 aa12.99□□□□□ -0.33
DDR1-241ENST00000460944 TYMSP04818 313 aa12.99□□□□□ -0.33
DDR1-241ENST00000460944 LGALS9BQ3B8N2 356 aa12.99□□□□□ -0.33
DDR1-241ENST00000460944 TMEM88Q6PEY1 159 aa12.99□□□□□ -0.33
DDR1-241ENST00000460944 MRPL16Q9NX20 251 aaKnown RBP12.99□□□□□ -0.33
DDR1-241ENST00000460944 IGHV3-16A0A0C4DH30 117 aa12.98□□□□□ -0.33
DDR1-241ENST00000460944 GNRH2O43555 120 aa12.98□□□□□ -0.33
DDR1-241ENST00000460944 BCL2P10415 239 aa12.98□□□□□ -0.33
DDR1-241ENST00000460944 TAGLN2P37802 199 aaKnown RBP12.98□□□□□ -0.33
DDR1-241ENST00000460944 MEF2BQ02080 365 aaPredicted RBP12.98□□□□□ -0.33
DDR1-241ENST00000460944 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
DDR1-241ENST00000460944 DNAH1Q9P2D7 4330 aa12.98□□□□□ -0.33
DDR1-241ENST00000460944 COX8CQ7Z4L0 72 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 C15orf53Q8NAA6 179 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 C11orf52Q96A22 123 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 ZC2HC1AQ96GY0 325 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 C18orf15Q96N68 181 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 C11orf21Q9P2W6 132 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 VAX2Q9UIW0 290 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 RYR3Q15413 4870 aa12.97□□□□□ -0.33
DDR1-241ENST00000460944 PDE6DO43924 150 aa12.96□□□□□ -0.33
DDR1-241ENST00000460944 OR5I1Q13606 314 aa12.96□□□□□ -0.33
DDR1-241ENST00000460944 FAM162BQ5T6X4 162 aa12.96□□□□□ -0.33
DDR1-241ENST00000460944 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
DDR1-241ENST00000460944 M0R2P5 195 aa12.95□□□□□ -0.34
DDR1-241ENST00000460944 SH2D1AO60880 128 aa12.94□□□□□ -0.34
DDR1-241ENST00000460944 ORM1P02763 201 aa12.94□□□□□ -0.34
DDR1-241ENST00000460944 S100A4P26447 101 aaKnown RBP12.94□□□□□ -0.34
DDR1-241ENST00000460944 RPL35P42766 123 aaKnown RBP12.94□□□□□ -0.34
DDR1-241ENST00000460944 NHLRC2Q8NBF2 726 aa12.94□□□□□ -0.34
DDR1-241ENST00000460944 B4DEV8 164 aa12.93□□□□□ -0.34
DDR1-241ENST00000460944 P0DMU3 169 aa12.93□□□□□ -0.34
DDR1-241ENST00000460944 FAM231AP0DMU4 169 aa12.93□□□□□ -0.34
DDR1-241ENST00000460944 FAM231CP0DMU5 169 aa12.93□□□□□ -0.34
DDR1-241ENST00000460944 ZNF674Q2M3X9 581 aa12.93□□□□□ -0.34
DDR1-241ENST00000460944 RASL10AQ92737 203 aa12.93□□□□□ -0.34
DDR1-241ENST00000460944 MED9Q9NWA0 146 aa12.93□□□□□ -0.34
DDR1-241ENST00000460944 TRAV26-1A0A087WT03 109 aa12.92□□□□□ -0.34
DDR1-241ENST00000460944 IGKV3D-20A0A0C4DH25 116 aa12.92□□□□□ -0.34
DDR1-241ENST00000460944 IGHV3-53P01767 116 aa12.92□□□□□ -0.34
DDR1-241ENST00000460944 HOXA5P20719 270 aa12.92□□□□□ -0.34
DDR1-241ENST00000460944 ASIPP42127 132 aa12.92□□□□□ -0.34
DDR1-241ENST00000460944 CRIP1P50238 77 aa12.92□□□□□ -0.34
DDR1-241ENST00000460944 M0R036 132 aa12.91□□□□□ -0.34
DDR1-241ENST00000460944 NUDT3O95989 172 aa12.91□□□□□ -0.34
DDR1-241ENST00000460944 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
DDR1-241ENST00000460944 LYPD6BQ8NI32 183 aa12.91□□□□□ -0.34
DDR1-241ENST00000460944 DERL1Q9BUN8 251 aa12.91□□□□□ -0.34
DDR1-241ENST00000460944 NACAE9PAV3 2078 aa12.91□□□□□ -0.34
DDR1-241ENST00000460944 HYDINQ4G0P3 5121 aa12.9□□□□□ -0.34
DDR1-241ENST00000460944 A0A0J9YY99 117 aa12.9□□□□□ -0.34
DDR1-241ENST00000460944 C9JCJ5 164 aa12.9□□□□□ -0.34
DDR1-241ENST00000460944 LINC01559Q495D7 138 aa12.9□□□□□ -0.34
DDR1-241ENST00000460944 CENPWQ5EE01 88 aa12.9□□□□□ -0.34
DDR1-241ENST00000460944 C9orf85Q96MD7 179 aa12.9□□□□□ -0.34
DDR1-241ENST00000460944 MLST8Q9BVC4 326 aa12.9□□□□□ -0.34
DDR1-241ENST00000460944 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
DDR1-241ENST00000460944 KRBOX1C9JBD0 128 aa12.89□□□□□ -0.35
DDR1-241ENST00000460944 GNG4P50150 75 aa12.89□□□□□ -0.35
DDR1-241ENST00000460944 SLAQ13239 276 aa12.89□□□□□ -0.35
DDR1-241ENST00000460944 ZNF876PQ49A33 203 aa12.89□□□□□ -0.35
DDR1-241ENST00000460944 PRR27Q6MZM9 219 aa12.89□□□□□ -0.35
DDR1-241ENST00000460944 TRAV4A0A0B4J268 109 aa12.88□□□□□ -0.35
DDR1-241ENST00000460944 TRGV4A0A0C4DH28 118 aa12.88□□□□□ -0.35
DDR1-241ENST00000460944 H3BNG1 76 aa12.88□□□□□ -0.35
DDR1-241ENST00000460944 RNASE3P12724 160 aaKnown RBP12.88□□□□□ -0.35
DDR1-241ENST00000460944 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
DDR1-241ENST00000460944 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
DDR1-241ENST00000460944 SMIM12Q96EX1 92 aa12.88□□□□□ -0.35
DDR1-241ENST00000460944 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
DDR1-241ENST00000460944 RAB19A4D1S5 217 aa12.87□□□□□ -0.35
DDR1-241ENST00000460944 GRIFINA4D1Z8 144 aa12.87□□□□□ -0.35
DDR1-241ENST00000460944 H3BVH4 76 aa12.87□□□□□ -0.35
DDR1-241ENST00000460944 SFTA3P0C7M3 94 aa12.87□□□□□ -0.35
DDR1-241ENST00000460944 MGST1P10620 155 aaKnown RBP12.87□□□□□ -0.35
DDR1-241ENST00000460944 TOR2AQ5JU69 321 aa12.87□□□□□ -0.35
DDR1-241ENST00000460944 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms