RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 FAM210BQ96KR6 192 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 HLA-DRB4X5D2U9 266 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 NUP35Q8NFH5 326 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 IMMP2LQ96T52 175 aa12.44□□□□□ -0.42
NELFCD-201ENST00000460601 TRBV24-1A0A075B6N3 115 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 KLLNB2CW77 178 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 OR11H12B2RN74 326 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 CRISP2P16562 243 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 BEAN1Q3B7T3 259 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 PRR31Q5SQ13 230 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 NAGKQ9UJ70 344 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 TMEM189A5PLL7 270 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 MUC21Q5SSG8 566 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 PYGO2Q9BRQ0 406 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 C2orf88Q9BSF0 95 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 TPPP3Q9BW30 176 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 C19orf73Q9NVV2 129 aa12.43□□□□□ -0.42
NELFCD-201ENST00000460601 A0A1B0GV90 55 aa12.42□□□□□ -0.42
NELFCD-201ENST00000460601 GRIFINA4D1Z8 144 aa12.42□□□□□ -0.42
NELFCD-201ENST00000460601 A8MWL6 223 aa12.42□□□□□ -0.42
NELFCD-201ENST00000460601 TRGC2P03986 189 aa12.42□□□□□ -0.42
NELFCD-201ENST00000460601 C9orf66Q5T8R8 295 aa12.42□□□□□ -0.42
NELFCD-201ENST00000460601 GFI1BQ5VTD9 330 aa12.42□□□□□ -0.42
NELFCD-201ENST00000460601 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
NELFCD-201ENST00000460601 PGLYRP4Q96LB8 373 aa12.42□□□□□ -0.42
NELFCD-201ENST00000460601 TRAV12-3A0A0B4J271 114 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 MUC21A0A0G2JKD1 596 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 MUC21A0A140T8X8 626 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 CT83Q5H943 113 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 OR2K2Q8NGT1 345 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 DUSP14O95147 198 aaKnown RBP12.41□□□□□ -0.42
NELFCD-201ENST00000460601 CDKN1BP46527 198 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 RAB4BP61018 213 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 WFDC9Q8NEX5 89 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 NAT8BQ9UHF3 227 aa12.41□□□□□ -0.42
NELFCD-201ENST00000460601 TRGC1P0CF51 173 aa12.4□□□□□ -0.42
NELFCD-201ENST00000460601 RBMY1A1P0DJD3 496 aaKnown RBP12.4□□□□□ -0.43
NELFCD-201ENST00000460601 RBMY1CP0DJD4 496 aa12.4□□□□□ -0.43
NELFCD-201ENST00000460601 INSL3P51460 131 aa12.4□□□□□ -0.43
NELFCD-201ENST00000460601 RBMY1FQ15415 496 aaKnown RBP12.4□□□□□ -0.43
NELFCD-201ENST00000460601 LINC01559Q495D7 138 aa12.4□□□□□ -0.43
NELFCD-201ENST00000460601 Q6AWC8 147 aa12.4□□□□□ -0.43
NELFCD-201ENST00000460601 BTF3L4Q96K17 158 aa12.4□□□□□ -0.43
NELFCD-201ENST00000460601 MDFIQ99750 246 aa12.4□□□□□ -0.43
NELFCD-201ENST00000460601 ANK2Q01484 3957 aa12.39□□□□□ -0.43
NELFCD-201ENST00000460601 CMYA5Q8N3K9 4069 aa12.39□□□□□ -0.43
NELFCD-201ENST00000460601 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
NELFCD-201ENST00000460601 CRXO43186 299 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-201ENST00000460601 FRZBQ92765 325 aa12.39□□□□□ -0.43
NELFCD-201ENST00000460601 PACRGQ96M98 296 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-201ENST00000460601 TRAV21A0A0B4J279 112 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 PHOX2AO14813 284 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
NELFCD-201ENST00000460601 FABP4P15090 132 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 OXLD1Q5BKU9 147 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 STHQ8IWL8 128 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 ODF3Q96PU9 254 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 C7orf71A4D174 169 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 A8MTW9 85 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 LEPP41159 167 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 JOSD1Q15040 202 aaPredicted RBP12.38□□□□□ -0.43
NELFCD-201ENST00000460601 ANXA2RQ3ZCQ2 193 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 DEFB125Q8N687 156 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 HIST1H2BLQ99880 126 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 GFRA4Q9GZZ7 299 aa12.38□□□□□ -0.43
NELFCD-201ENST00000460601 SPRY2O43597 315 aa12.37□□□□□ -0.43
NELFCD-201ENST00000460601 ARMS2P0C7Q2 107 aa12.37□□□□□ -0.43
NELFCD-201ENST00000460601 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
NELFCD-201ENST00000460601 GNRH2O43555 120 aa12.36□□□□□ -0.43
NELFCD-201ENST00000460601 PRM2P04554 102 aa12.36□□□□□ -0.43
NELFCD-201ENST00000460601 TYMSP04818 313 aa12.36□□□□□ -0.43
NELFCD-201ENST00000460601 CAMPP49913 170 aa12.36□□□□□ -0.43
NELFCD-201ENST00000460601 PDZD11Q5EBL8 140 aa12.36□□□□□ -0.43
NELFCD-201ENST00000460601 TRPT1Q86TN4 253 aaKnown RBP12.36□□□□□ -0.43
NELFCD-201ENST00000460601 TP53TG3Q9ULZ0 132 aa12.36□□□□□ -0.43
NELFCD-201ENST00000460601 FOXA3P55318 350 aaPredicted RBP12.35□□□□□ -0.43
NELFCD-201ENST00000460601 SRD5A3Q9H8P0 318 aa12.35□□□□□ -0.43
NELFCD-201ENST00000460601 XCL2Q9UBD3 114 aa12.35□□□□□ -0.43
NELFCD-201ENST00000460601 IGLC6P0CF74 106 aa12.35□□□□□ -0.43
NELFCD-201ENST00000460601 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
NELFCD-201ENST00000460601 TSPOP30536 169 aa12.35□□□□□ -0.43
NELFCD-201ENST00000460601 MCRIP2Q9BUT9 160 aaKnown RBP12.35□□□□□ -0.43
NELFCD-201ENST00000460601 TIMM8BQ9Y5J9 83 aaPredicted RBP12.35□□□□□ -0.43
NELFCD-201ENST00000460601 TRAV9-1A0A075B6T8 112 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 XKRY2A2RUG3 117 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 HTN1P15515 57 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 GTSCR1Q86UQ5 136 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 H3BVH4 76 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
NELFCD-201ENST00000460601 FAM110AQ9BQ89 295 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
NELFCD-201ENST00000460601 SSBP4Q9BWG4 385 aaPredicted RBP12.34□□□□□ -0.43
NELFCD-201ENST00000460601 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
NELFCD-201ENST00000460601 BTF3P20290 206 aaKnown RBP12.33□□□□□ -0.44
NELFCD-201ENST00000460601 A0A1B0GXF2 115 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms