RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 AJUBAQ96IF1 538 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 LINC00477Q96M19 166 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 METTL26Q96S19 204 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 CCL19Q99731 98 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 MCRIP2Q9BUT9 160 aaKnown RBP4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 TM2D2Q9BX73 214 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 FBN2P35556 2912 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 IGKV3D-20A0A0C4DH25 116 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 IGHV7-4-1A0A0J9YVY3 117 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 A0A1W2PPM0 123 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 OVOL1O14753 267 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 CLEC3BP05452 202 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 PLNP26678 52 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 EFNA4P52798 201 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 RPL32P62910 135 aaKnown RBP4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 PRB3Q04118 309 aaPredicted RBP4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 DEFB113Q30KQ7 82 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 C19orf54Q5BKX5 351 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 PRR31Q5SQ13 230 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 NEGR1Q7Z3B1 354 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 APRG1Q8IVJ8 170 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 NRACQ8N912 160 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 MYOZ3Q8TDC0 251 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 C20orf78Q9BR46 151 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 AGPAT4-IT1Q9H0P7 198 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 MSRB1Q9NZV6 116 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 DKK2Q9UBU2 259 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 S4R3C0 116 aa4.7□□□□□ -1.66
UBQLN4-202ENST00000459954 A0A087WX48 190 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 TRAV8-2A0A0B4J237 113 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 G3V4G9 280 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 SMKR1H3BMG3 65 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 ATP6V0E1O15342 81 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 ZNF207O43670 478 aaKnown RBP4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 PRSS1P07477 247 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 FABP2P12104 132 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 ZFP36P26651 326 aaKnown RBP4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 HLA-DMBP28068 263 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 ATP5G2Q06055 141 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 ERCC8Q13216 396 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 ORMDL2Q53FV1 153 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 SAMD13Q5VXD3 122 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 C8orf86Q6ZUL3 223 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 POM121L12Q8N7R1 296 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 Q8TAT8 98 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 TMEM158Q8WZ71 300 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 CCDC140Q96MF4 163 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 VPS25Q9BRG1 176 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 UBTD1Q9HAC8 227 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 TP73-AS1Q9UF72 201 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 MYO9AB2RTY4 2548 aa4.69□□□□□ -1.66
UBQLN4-202ENST00000459954 POLQO75417 2590 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 AKAP6Q13023 2319 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 OTOGQ6ZRI0 2925 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 PDZD2O15018 2839 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 TRBV25-1A0A075B6N4 114 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 TRAV21A0A0B4J279 112 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 PRAC2D3DTV9 90 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 H3BUT2 72 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 H7C1H1 209 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 NDUFA4O00483 81 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 NPFFO15130 113 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 IGHV3-23P01764 117 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 NMUP48645 174 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 ATP5J2P56134 94 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 LMO4P61968 165 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 FOXE3Q13461 319 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 SAMD5Q5TGI4 173 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 ERASQ7Z444 233 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 CEND1Q8N111 149 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 C5orf56Q8N8D9 126 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 PHLDA1Q8WV24 401 aaPredicted RBP4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 USMG5Q96IX5 58 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 CHAC1Q9BUX1 264 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 SMIM2Q9BVW6 85 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 CSTL1Q9H114 145 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 MEGF9Q9H1U4 602 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 DPH3P1Q9H4G8 78 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 C11orf21Q9P2W6 132 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 ZNF580Q9UK33 172 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 MOB4Q9Y3A3 225 aa4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 HRNRQ86YZ3 2850 aaPredicted RBP4.68□□□□□ -1.66
UBQLN4-202ENST00000459954 TRAV41A0A0B4J266 112 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 IGHV1-69DA0A0B4J2H0 117 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 A0A1B0GWB2 263 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 E9PLD3 99 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 F8VRH5 84 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 F8W1H4 67 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 LY6HO94772 140 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 NXPH4O95158 308 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 IGF1P05019 195 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 SAA4P35542 130 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 ECSCRQ19T08 205 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 PAPPA-AS1Q5QFB9 102 aa4.67□□□□□ -1.66
UBQLN4-202ENST00000459954 ZC2HC1BQ5TFG8 222 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms