RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 NHLRC2Q8NBF2 726 aa8.22□□□□□ -1.09
GPNMB-204ENST00000459927 HYLS1Q96M11 299 aa8.22□□□□□ -1.09
GPNMB-204ENST00000459927 NMES1Q9C002 83 aa8.22□□□□□ -1.09
GPNMB-204ENST00000459927 KCNIP2Q9NS61 270 aa8.22□□□□□ -1.09
GPNMB-204ENST00000459927 MBD2Q9UBB5 411 aa8.22□□□□□ -1.09
GPNMB-204ENST00000459927 NAGKQ9UJ70 344 aa8.22□□□□□ -1.09
GPNMB-204ENST00000459927 TRAV21A0A0B4J279 112 aa8.21□□□□□ -1.1
GPNMB-204ENST00000459927 J3QL48 77 aa8.21□□□□□ -1.1
GPNMB-204ENST00000459927 TYMSP04818 313 aa8.21□□□□□ -1.1
GPNMB-204ENST00000459927 ARL6IP6Q8N6S5 226 aa8.21□□□□□ -1.1
GPNMB-204ENST00000459927 SLC25A29Q8N8R3 303 aa8.21□□□□□ -1.1
GPNMB-204ENST00000459927 OTORQ9NRC9 128 aa8.21□□□□□ -1.1
GPNMB-204ENST00000459927 RS1O15537 224 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 CIDEAO60543 219 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 IGHV3-30P01768 117 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 IGHV3-33P01772 117 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 IGHV3-30-3P0DP02 117 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 IGHV3-30-5P0DP03 117 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 PPT1P50897 306 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 UBE2L3P68036 154 aaKnown RBP8.2□□□□□ -1.1
GPNMB-204ENST00000459927 CYCSP99999 105 aaKnown RBP8.2□□□□□ -1.1
GPNMB-204ENST00000459927 OR10J3Q5JRS4 329 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 FFAR4Q5NUL3 377 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 MZT2BQ6NZ67 158 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 KCNS1Q96KK3 526 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 CCDC32Q9BV29 185 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 Q9HAA7 133 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 TREM1Q9NP99 234 aa8.2□□□□□ -1.1
GPNMB-204ENST00000459927 TRBV6-4A0A1B0GX49 114 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 FBLL1A6NHQ2 334 aaKnown RBP8.19□□□□□ -1.1
GPNMB-204ENST00000459927 EIF3GO75821 320 aaKnown RBP eCLIP8.19□□□□□ -1.1
GPNMB-204ENST00000459927 TAS2R45P59539 299 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 ZNF876PQ49A33 203 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 KHDC3LQ587J8 217 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 FAM74A1Q5RGS3 127 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 LELP1Q5T871 98 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 CFAP126Q5VTH2 177 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 DPPA3Q6W0C5 159 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 CMTM2Q8TAZ6 248 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 SCGB1C1Q8TD33 95 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 SDF2L1Q9HCN8 221 aa8.19□□□□□ -1.1
GPNMB-204ENST00000459927 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-204ENST00000459927 GOLT1AQ6ZVE7 132 aa8.18□□□□□ -1.1
GPNMB-204ENST00000459927 ASB13Q8WXK3 278 aa8.18□□□□□ -1.1
GPNMB-204ENST00000459927 ATP5SQ99766 215 aa8.18□□□□□ -1.1
GPNMB-204ENST00000459927 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
GPNMB-204ENST00000459927 GTSF1LQ9H1H1 148 aa8.18□□□□□ -1.1
GPNMB-204ENST00000459927 TRAV8-1A0A0A6YYK1 113 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
GPNMB-204ENST00000459927 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 PTH2Q96A98 100 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 SGK494Q96LW2 274 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 NDUFA13Q9P0J0 144 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 C11orf21Q9P2W6 132 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 RPH3ALQ9UNE2 315 aa8.17□□□□□ -1.1
GPNMB-204ENST00000459927 PGPEP1LA6NFU8 196 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 F6UZH7 168 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 TAAR5O14804 337 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 ZNF80P51504 273 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-204ENST00000459927 H2BFSP57053 126 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 ASAH1Q13510 395 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 WFDC2Q14508 124 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 RHOHQ15669 191 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 PQLC2Q6ZP29 291 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 Q6ZSA8 131 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 PPP1R1CQ8WVI7 109 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 HSPB11Q9Y547 144 aa8.16□□□□□ -1.1
GPNMB-204ENST00000459927 A0A1W2PPV4 95 aa8.15□□□□□ -1.1
GPNMB-204ENST00000459927 RPL12P30050 165 aaKnown RBP8.15□□□□□ -1.1
GPNMB-204ENST00000459927 GNG5P63218 68 aa8.15□□□□□ -1.1
GPNMB-204ENST00000459927 LAGE3Q14657 143 aa8.15□□□□□ -1.1
GPNMB-204ENST00000459927 DEFB104AQ8WTQ1 72 aa8.15□□□□□ -1.1
GPNMB-204ENST00000459927 C9orf85Q96MD7 179 aa8.15□□□□□ -1.1
GPNMB-204ENST00000459927 SMIM3Q9BZL3 60 aa8.15□□□□□ -1.1
GPNMB-204ENST00000459927 WFDC1Q9HC57 220 aa8.15□□□□□ -1.1
GPNMB-204ENST00000459927 TRAV8-3A0A0A6YYJ7 113 aa8.14□□□□□ -1.11
GPNMB-204ENST00000459927 MPC2O95563 127 aa8.14□□□□□ -1.11
GPNMB-204ENST00000459927 MGST1P10620 155 aaKnown RBP8.14□□□□□ -1.11
GPNMB-204ENST00000459927 ACOT6Q3I5F7 207 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-204ENST00000459927 LINC00299Q6ZSB3 139 aa8.14□□□□□ -1.11
GPNMB-204ENST00000459927 Q8N3U1 123 aa8.14□□□□□ -1.11
GPNMB-204ENST00000459927 INMT-MINDY4F8WBC2 141 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 HMGB3O15347 200 aaKnown RBP8.13□□□□□ -1.11
GPNMB-204ENST00000459927 RNASE3P12724 160 aaKnown RBP8.13□□□□□ -1.11
GPNMB-204ENST00000459927 ZNF506Q5JVG8 444 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 DAZ4Q86SG3 579 aaKnown RBP8.13□□□□□ -1.11
GPNMB-204ENST00000459927 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 OR10G9Q8NGN4 311 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 OR10G7Q8NGN6 311 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 SH3BGRL3Q9H299 93 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 DAZ3Q9NR90 486 aaKnown RBP8.13□□□□□ -1.11
GPNMB-204ENST00000459927 Q9UF83 564 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 PSG8Q9UQ74 426 aa8.13□□□□□ -1.11
GPNMB-204ENST00000459927 LRP1Q07954 4544 aaKnown RBP8.12□□□□□ -1.11
GPNMB-204ENST00000459927 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
GPNMB-204ENST00000459927 LECT2O14960 151 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms