RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 LY6DQ14210 128 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 LCNL1Q6ZST4 164 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 Q8N8P6 123 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 METTL26Q96S19 204 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 SLC50A1Q9BRV3 221 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 SPANXN1Q5VSR9 72 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 C5orf56Q8N8D9 126 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 EEF1AKMT3Q96AZ1 226 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 C16orf92Q96LL3 132 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
SCFD1-203ENST00000458591 RBAKDNA6NC62 111 aa10.78□□□□□ -0.68
SCFD1-203ENST00000458591 F6UB75 175 aa10.78□□□□□ -0.68
SCFD1-203ENST00000458591 C19orf84I3L1E1 186 aa10.78□□□□□ -0.68
SCFD1-203ENST00000458591 NPFFO15130 113 aa10.78□□□□□ -0.68
SCFD1-203ENST00000458591 RAB9AP51151 201 aa10.78□□□□□ -0.68
SCFD1-203ENST00000458591 GLMPQ8WWB7 406 aa10.78□□□□□ -0.68
SCFD1-203ENST00000458591 IGHV3-11P01762 117 aa10.77□□□□□ -0.68
SCFD1-203ENST00000458591 ATP5G2Q06055 141 aa10.77□□□□□ -0.69
SCFD1-203ENST00000458591 ITPR1Q14643 2758 aa10.77□□□□□ -0.69
SCFD1-203ENST00000458591 M0R381 172 aa10.76□□□□□ -0.69
SCFD1-203ENST00000458591 LY6EQ16553 131 aa10.76□□□□□ -0.69
SCFD1-203ENST00000458591 GPHB5Q86YW7 130 aa10.76□□□□□ -0.69
SCFD1-203ENST00000458591 TRBV25-1A0A075B6N4 114 aa10.76□□□□□ -0.69
SCFD1-203ENST00000458591 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
SCFD1-203ENST00000458591 EDN2P20800 178 aa10.76□□□□□ -0.69
SCFD1-203ENST00000458591 U3KQE9 123 aa10.76□□□□□ -0.69
SCFD1-203ENST00000458591 LAGE3Q14657 143 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 C9orf47Q6ZRZ4 202 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 CEND1Q8N111 149 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 MYOZ3Q8TDC0 251 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 WFDC12Q8WWY7 111 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 RPL39LQ96EH5 51 aaKnown RBP10.75□□□□□ -0.69
SCFD1-203ENST00000458591 CELSR2Q9HCU4 2923 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 SRD5A1P18405 259 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
SCFD1-203ENST00000458591 SRSF1Q07955 248 aaKnown RBP eCLIP10.75□□□□□ -0.69
SCFD1-203ENST00000458591 Q6ZS46 218 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
SCFD1-203ENST00000458591 NHP2Q9NX24 153 aaKnown RBP10.75□□□□□ -0.69
SCFD1-203ENST00000458591 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
SCFD1-203ENST00000458591 ABCA2Q9BZC7 2435 aa10.74□□□□□ -0.69
SCFD1-203ENST00000458591 GNRH2O43555 120 aa10.74□□□□□ -0.69
SCFD1-203ENST00000458591 ARL3P36405 182 aa10.74□□□□□ -0.69
SCFD1-203ENST00000458591 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-203ENST00000458591 RPL11P62913 178 aaKnown RBP10.73□□□□□ -0.69
SCFD1-203ENST00000458591 KLK9Q2XQG4 91 aa10.73□□□□□ -0.69
SCFD1-203ENST00000458591 ITLN2Q8WWU7 325 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-203ENST00000458591 KLK9Q9UKQ9 250 aa10.73□□□□□ -0.69
SCFD1-203ENST00000458591 CSMD2Q7Z408 3487 aa10.73□□□□□ -0.69
SCFD1-203ENST00000458591 TAL2Q16559 108 aa10.73□□□□□ -0.69
SCFD1-203ENST00000458591 CRYBG3Q68DQ2 2970 aa10.73□□□□□ -0.69
SCFD1-203ENST00000458591 PHLDA1Q8WV24 401 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-203ENST00000458591 PLNP26678 52 aa10.72□□□□□ -0.69
SCFD1-203ENST00000458591 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
SCFD1-203ENST00000458591 PRSS47A8MTI9 375 aa10.72□□□□□ -0.69
SCFD1-203ENST00000458591 RNASE4P34096 147 aaKnown RBP10.72□□□□□ -0.69
SCFD1-203ENST00000458591 ANXA2RQ3ZCQ2 193 aa10.72□□□□□ -0.69
SCFD1-203ENST00000458591 RASL10AQ92737 203 aa10.72□□□□□ -0.69
SCFD1-203ENST00000458591 SPOCK3Q9BQ16 436 aa10.72□□□□□ -0.69
SCFD1-203ENST00000458591 HIF1ANQ9NWT6 349 aa10.72□□□□□ -0.69
SCFD1-203ENST00000458591 A0A087WX48 190 aa10.71□□□□□ -0.69
SCFD1-203ENST00000458591 IGHV4-38-2P0DP08 117 aa10.71□□□□□ -0.69
SCFD1-203ENST00000458591 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 IGHV4-39P01824 125 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 MGPP08493 103 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 BLCAPP62952 87 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 C19orf54Q5BKX5 351 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 SPG11Q96JI7 2443 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 E9PLD3 99 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 J3QR89 54 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
SCFD1-203ENST00000458591 ZNF479Q96JC4 524 aa10.7□□□□□ -0.7
SCFD1-203ENST00000458591 F8W1H4 67 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 S100A4P26447 101 aaKnown RBP10.69□□□□□ -0.7
SCFD1-203ENST00000458591 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 IGHV4-4A0A075B6R2 117 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 IGLL5B9A064 214 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 RNF223E7ERA6 249 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-203ENST00000458591 SAMD13Q5VXD3 122 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 JPT2Q9H910 190 aa10.69□□□□□ -0.7
SCFD1-203ENST00000458591 IGHV4-61A0A0C4DH41 118 aa10.68□□□□□ -0.7
SCFD1-203ENST00000458591 SOCS3O14543 225 aa10.68□□□□□ -0.7
SCFD1-203ENST00000458591 MTURNQ8N3F0 131 aa10.68□□□□□ -0.7
SCFD1-203ENST00000458591 MRAP2Q96G30 205 aa10.68□□□□□ -0.7
SCFD1-203ENST00000458591 FOXI2Q6ZQN5 318 aa10.68□□□□□ -0.7
SCFD1-203ENST00000458591 UTP20O75691 2785 aaKnown RBP10.68□□□□□ -0.7
SCFD1-203ENST00000458591 TRAV12-1A0A0B4J245 112 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 H7C1H1 209 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 C12orf74Q32Q52 190 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 C9orf139Q6ZV77 190 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 SCGB3A1Q96QR1 104 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 PHLDA3Q9Y5J5 127 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 IGHV1-69DA0A0B4J2H0 117 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 IGHV1-69P01742 117 aa10.67□□□□□ -0.7
SCFD1-203ENST00000458591 PF4V1P10720 104 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms