RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 MGPP08493 103 aa14.97□□□□□ -0.01
CNEP1R1-203ENST00000458059 EBI3Q14213 229 aa14.97□□□□□ -0.01
CNEP1R1-203ENST00000458059 LY6EQ16553 131 aa14.97□□□□□ -0.01
CNEP1R1-203ENST00000458059 MINOS1Q5TGZ0 78 aa14.97□□□□□ -0.01
CNEP1R1-203ENST00000458059 UNQ9165/PRO28630Q6UXU0 137 aa14.97□□□□□ -0.01
CNEP1R1-203ENST00000458059 RPL39LQ96EH5 51 aaKnown RBP14.97□□□□□ -0.01
CNEP1R1-203ENST00000458059 MINOS1-NBL1R4GNA1 71 aa14.97□□□□□ -0.01
CNEP1R1-203ENST00000458059 LAGE3Q14657 143 aa14.96□□□□□ -0.01
CNEP1R1-203ENST00000458059 C14orf178Q8N769 122 aaPredicted RBP14.96□□□□□ -0.01
CNEP1R1-203ENST00000458059 NRACQ8N912 160 aa14.96□□□□□ -0.01
CNEP1R1-203ENST00000458059 AJUBAQ96IF1 538 aa14.96□□□□□ -0.01
CNEP1R1-203ENST00000458059 EEF1AKMT3Q96AZ1 226 aa14.96□□□□□ -0.02
CNEP1R1-203ENST00000458059 SLC50A1Q9BRV3 221 aa14.96□□□□□ -0.02
CNEP1R1-203ENST00000458059 IGLV2-18A0A075B6J9 118 aa14.95□□□□□ -0.02
CNEP1R1-203ENST00000458059 S100A4P26447 101 aaKnown RBP14.95□□□□□ -0.02
CNEP1R1-203ENST00000458059 FBXL19-AS1Q494R0 122 aa14.95□□□□□ -0.02
CNEP1R1-203ENST00000458059 AMTNQ6UX39 209 aa14.95□□□□□ -0.02
CNEP1R1-203ENST00000458059 SIVA1O15304 175 aa14.94□□□□□ -0.02
CNEP1R1-203ENST00000458059 SFTA2Q6UW10 78 aa14.94□□□□□ -0.02
CNEP1R1-203ENST00000458059 CSTL1Q9H114 145 aa14.94□□□□□ -0.02
CNEP1R1-203ENST00000458059 USP9YO00507 2555 aaPredicted RBP14.94□□□□□ -0.02
CNEP1R1-203ENST00000458059 EMP1P54849 157 aa14.93□□□□□ -0.02
CNEP1R1-203ENST00000458059 ATP5G2Q06055 141 aa14.93□□□□□ -0.02
CNEP1R1-203ENST00000458059 CSMD2Q7Z408 3487 aa14.93□□□□□ -0.02
CNEP1R1-203ENST00000458059 UTP20O75691 2785 aaKnown RBP14.93□□□□□ -0.02
CNEP1R1-203ENST00000458059 CENPVL3A0A0U1RRI6 287 aa14.92□□□□□ -0.02
CNEP1R1-203ENST00000458059 UBE2E1P51965 193 aa14.92□□□□□ -0.02
CNEP1R1-203ENST00000458059 NPFFR1Q9GZQ6 430 aa14.92□□□□□ -0.02
CNEP1R1-203ENST00000458059 ZMAT4Q9H898 229 aa14.92□□□□□ -0.02
CNEP1R1-203ENST00000458059 NBL1P41271 181 aa14.92□□□□□ -0.02
CNEP1R1-203ENST00000458059 TMEM190Q8WZ59 177 aa14.92□□□□□ -0.02
CNEP1R1-203ENST00000458059 HIST1H4GQ99525 98 aa14.92□□□□□ -0.02
CNEP1R1-203ENST00000458059 OOSP1A8MZH6 123 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 TEX48A0A1B0GUV7 120 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 ATP5LO75964 103 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 RNASE4P34096 147 aaKnown RBP14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 LY6DQ14210 128 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 ITPR1Q14643 2758 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 POLQO75417 2590 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 NPFFO15130 113 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 GNRH2O43555 120 aa14.91□□□□□ -0.02
CNEP1R1-203ENST00000458059 ARL3P36405 182 aa14.9□□□□□ -0.02
CNEP1R1-203ENST00000458059 C1orf122Q6ZSJ8 110 aa14.9□□□□□ -0.02
CNEP1R1-203ENST00000458059 CEND1Q8N111 149 aa14.9□□□□□ -0.02
CNEP1R1-203ENST00000458059 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 EDN2P20800 178 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 RAB9AP51151 201 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 SCGB3A1Q96QR1 104 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 TRAV41A0A0B4J266 112 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 RBAKDNA6NC62 111 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 SRSF1Q07955 248 aaKnown RBP eCLIP14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 C5orf56Q8N8D9 126 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 CYSLTR1Q9Y271 337 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 PHLDA3Q9Y5J5 127 aa14.89□□□□□ -0.03
CNEP1R1-203ENST00000458059 G3V4G9 280 aa14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 ARL6IP6Q8N6S5 226 aa14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 H3BMG7 143 aa14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 SRSF2Q01130 221 aaKnown RBP14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 ANXA2RQ3ZCQ2 193 aa14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 FLNCQ14315 2725 aa14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 KLRB1Q12918 225 aa14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 SMIM2Q9BVW6 85 aa14.88□□□□□ -0.03
CNEP1R1-203ENST00000458059 A0A087WX48 190 aa14.87□□□□□ -0.03
CNEP1R1-203ENST00000458059 WFDC2Q14508 124 aa14.87□□□□□ -0.03
CNEP1R1-203ENST00000458059 ZANQ9Y493 2812 aa14.87□□□□□ -0.03
CNEP1R1-203ENST00000458059 LMO4P61968 165 aa14.87□□□□□ -0.03
CNEP1R1-203ENST00000458059 C9orf47Q6ZRZ4 202 aa14.86□□□□□ -0.03
CNEP1R1-203ENST00000458059 MUC4Q99102 2169 aa14.86□□□□□ -0.03
CNEP1R1-203ENST00000458059 TRBV7-1A0A0A6YYK4 115 aa14.86□□□□□ -0.03
CNEP1R1-203ENST00000458059 SH2D6Q7Z4S9 175 aa14.86□□□□□ -0.03
CNEP1R1-203ENST00000458059 OR5A1Q8NGJ0 315 aa14.86□□□□□ -0.03
CNEP1R1-203ENST00000458059 RASL10AQ92737 203 aa14.86□□□□□ -0.03
CNEP1R1-203ENST00000458059 JPT2Q9H910 190 aa14.86□□□□□ -0.03
CNEP1R1-203ENST00000458059 SCGB2A2Q13296 93 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 Q6ZS46 218 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 PHLDA1Q8WV24 401 aaPredicted RBP14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 ZNF479Q96JC4 524 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 NOTCH3Q9UM47 2321 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 LINC01546A6NGU7 62 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 PF4V1P10720 104 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 SUMO2P61956 95 aaKnown RBP14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 GPHB5Q86YW7 130 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 CHTOPQ9Y3Y2 248 aaKnown RBP14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 IGKV3-20P01619 116 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 OR10J6PQ8NGY7 276 aa14.85□□□□□ -0.03
CNEP1R1-203ENST00000458059 ZFAND2AQ8N6M9 145 aa14.84□□□□□ -0.03
CNEP1R1-203ENST00000458059 HIGD1BQ9P298 99 aa14.84□□□□□ -0.03
CNEP1R1-203ENST00000458059 OR11H12B2RN74 326 aa14.83□□□□□ -0.03
CNEP1R1-203ENST00000458059 IGLL5B9A064 214 aa14.83□□□□□ -0.03
CNEP1R1-203ENST00000458059 C19orf84I3L1E1 186 aa14.83□□□□□ -0.03
CNEP1R1-203ENST00000458059 C12orf74Q32Q52 190 aa14.83□□□□□ -0.03
CNEP1R1-203ENST00000458059 OR11H1Q8NG94 326 aa14.83□□□□□ -0.03
CNEP1R1-203ENST00000458059 OR11H2Q8NH07 326 aa14.83□□□□□ -0.03
CNEP1R1-203ENST00000458059 SMPXQ9UHP9 88 aa14.83□□□□□ -0.03
CNEP1R1-203ENST00000458059 KLHL30-AS1Q8NEE0 82 aa14.83□□□□□ -0.04
CNEP1R1-203ENST00000458059 BLCAPP62952 87 aa14.82□□□□□ -0.04
CNEP1R1-203ENST00000458059 ETDBQ3ZM63 59 aa14.82□□□□□ -0.04
CNEP1R1-203ENST00000458059 C2orf66Q6UXQ4 117 aa14.82□□□□□ -0.04
CNEP1R1-203ENST00000458059 A0A087WWL8 130 aa14.82□□□□□ -0.04
CNEP1R1-203ENST00000458059 F8VRH5 84 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms