RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
MSH6-207ENST00000456246 TRAV4A0A0B4J268 109 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 A0A1W2PRE2 83 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 SUMO1P63165 101 aaKnown RBP12.32□□□□□ -0.44
MSH6-207ENST00000456246 TMEM75Q8N9X5 138 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 EPDR1Q9UM22 224 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 PSG8Q9UQ74 426 aa12.32□□□□□ -0.44
MSH6-207ENST00000456246 ORM1P02763 201 aa12.31□□□□□ -0.44
MSH6-207ENST00000456246 TYMSP04818 313 aa12.31□□□□□ -0.44
MSH6-207ENST00000456246 FLI1Q01543 452 aaPredicted RBP12.31□□□□□ -0.44
MSH6-207ENST00000456246 AKR1C8PQ5T2L2 129 aa12.31□□□□□ -0.44
MSH6-207ENST00000456246 PCNPQ8WW12 178 aaKnown RBP12.31□□□□□ -0.44
MSH6-207ENST00000456246 C8orf49Q96NF6 230 aa12.31□□□□□ -0.44
MSH6-207ENST00000456246 NKX6-2Q9C056 277 aaPredicted RBP12.31□□□□□ -0.44
MSH6-207ENST00000456246 HERC2O95714 4834 aa12.3□□□□□ -0.44
MSH6-207ENST00000456246 TNP2Q05952 138 aa12.3□□□□□ -0.44
MSH6-207ENST00000456246 SMUG1Q53HV7 270 aa12.3□□□□□ -0.44
MSH6-207ENST00000456246 SAPCD1Q5SSQ6 148 aa12.3□□□□□ -0.44
MSH6-207ENST00000456246 NEGR1Q7Z3B1 354 aa12.3□□□□□ -0.44
MSH6-207ENST00000456246 ZNF479Q96JC4 524 aa12.3□□□□□ -0.44
MSH6-207ENST00000456246 G3V3Q6 166 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 SIVA1O15304 175 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 ARPC5O15511 151 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 GNRH2O43555 120 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 PFN1P07737 140 aaKnown RBP12.29□□□□□ -0.44
MSH6-207ENST00000456246 SRIP30626 198 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 PPT1P50897 306 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 OR4C5Q8NGB2 326 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 SGK494Q96LW2 274 aa12.29□□□□□ -0.44
MSH6-207ENST00000456246 C9JCJ5 164 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 CIDEAO60543 219 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 GCGP01275 180 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 IGLV2-11P01706 119 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 TXNDC17Q9BRA2 123 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 KRTAP1-5Q9BYS1 174 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 KIAA1109Q2LD37 5005 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 PKD1P98161 4303 aa12.28□□□□□ -0.44
MSH6-207ENST00000456246 DNAH11Q96DT5 4516 aa12.27□□□□□ -0.44
MSH6-207ENST00000456246 NXPH4O95158 308 aa12.27□□□□□ -0.45
MSH6-207ENST00000456246 ZNF726P1Q15940 193 aa12.27□□□□□ -0.45
MSH6-207ENST00000456246 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.45
MSH6-207ENST00000456246 PRNTQ86SH4 94 aa12.27□□□□□ -0.45
MSH6-207ENST00000456246 K7EQD1 137 aa12.26□□□□□ -0.45
MSH6-207ENST00000456246 IFNA7P01567 189 aa12.26□□□□□ -0.45
MSH6-207ENST00000456246 ZNF345Q14585 488 aa12.26□□□□□ -0.45
MSH6-207ENST00000456246 LYPD5Q6UWN5 251 aa12.26□□□□□ -0.45
MSH6-207ENST00000456246 HIST1H2BAQ96A08 127 aa12.26□□□□□ -0.45
MSH6-207ENST00000456246 K7EP13 123 aa12.25□□□□□ -0.45
MSH6-207ENST00000456246 GYPEP15421 78 aa12.25□□□□□ -0.45
MSH6-207ENST00000456246 ZNF80P51504 273 aaPredicted RBP12.25□□□□□ -0.45
MSH6-207ENST00000456246 ZNF876PQ49A33 203 aa12.25□□□□□ -0.45
MSH6-207ENST00000456246 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
MSH6-207ENST00000456246 PTH2Q96A98 100 aa12.25□□□□□ -0.45
MSH6-207ENST00000456246 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
MSH6-207ENST00000456246 CYTL1Q9NRR1 136 aa12.25□□□□□ -0.45
MSH6-207ENST00000456246 TRAV9-2A0A087WT02 112 aa12.24□□□□□ -0.45
MSH6-207ENST00000456246 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
MSH6-207ENST00000456246 FAM74A7A6NL05 159 aa12.24□□□□□ -0.45
MSH6-207ENST00000456246 PEX7O00628 323 aa12.24□□□□□ -0.45
MSH6-207ENST00000456246 ZNF575Q86XF7 245 aa12.24□□□□□ -0.45
MSH6-207ENST00000456246 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
MSH6-207ENST00000456246 C11orf21Q9P2W6 132 aa12.24□□□□□ -0.45
MSH6-207ENST00000456246 C16orf90A8MZG2 172 aa12.23□□□□□ -0.45
MSH6-207ENST00000456246 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
MSH6-207ENST00000456246 LINC00315P59091 139 aa12.23□□□□□ -0.45
MSH6-207ENST00000456246 UBE2G2P60604 165 aa12.23□□□□□ -0.45
MSH6-207ENST00000456246 KCNRGQ8N5I3 272 aa12.23□□□□□ -0.45
MSH6-207ENST00000456246 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
MSH6-207ENST00000456246 ARL2-SNX15V9GYD0 113 aa12.23□□□□□ -0.45
MSH6-207ENST00000456246 FABP5P3A8MUU1 101 aa12.22□□□□□ -0.45
MSH6-207ENST00000456246 FGF8P55075 233 aaPredicted RBP12.22□□□□□ -0.45
MSH6-207ENST00000456246 Q86TA4 180 aa12.22□□□□□ -0.45
MSH6-207ENST00000456246 BOLA1Q9Y3E2 137 aa12.22□□□□□ -0.45
MSH6-207ENST00000456246 LY96Q9Y6Y9 160 aa12.22□□□□□ -0.45
MSH6-207ENST00000456246 DYNC1H1Q14204 4646 aaKnown RBP12.22□□□□□ -0.45
MSH6-207ENST00000456246 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 HMSDA8MTL9 139 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 UMAD1C9J7I0 102 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 RS1O15537 224 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 FHITP49789 147 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 TIRAPP58753 221 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 PIK3CD-AS1Q5SR53 167 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 NFE4Q86UQ8 179 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 ZFP30Q9Y2G7 519 aa12.21□□□□□ -0.45
MSH6-207ENST00000456246 A0A0D9SG52 128 aa12.2□□□□□ -0.46
MSH6-207ENST00000456246 TRBV6-4A0A1B0GX49 114 aa12.2□□□□□ -0.46
MSH6-207ENST00000456246 SEC11BP0C7V7 166 aa12.2□□□□□ -0.46
MSH6-207ENST00000456246 S100A4P26447 101 aaKnown RBP12.2□□□□□ -0.46
MSH6-207ENST00000456246 RHOHQ15669 191 aa12.2□□□□□ -0.46
MSH6-207ENST00000456246 CFAP126Q5VTH2 177 aa12.2□□□□□ -0.46
MSH6-207ENST00000456246 FMC1Q96HJ9 113 aa12.2□□□□□ -0.46
MSH6-207ENST00000456246 LINC00479Q96M42 142 aa12.2□□□□□ -0.46
MSH6-207ENST00000456246 SMLR1H3BR10 107 aa12.19□□□□□ -0.46
MSH6-207ENST00000456246 RNASE3P12724 160 aaKnown RBP12.19□□□□□ -0.46
MSH6-207ENST00000456246 EVI2AP22794 236 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms