RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 TCL1AP56279 114 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 ZNF415Q09FC8 603 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 SMUG1Q53HV7 270 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 TMEM88Q6PEY1 159 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 LINC00476Q8WZB0 136 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 HIST1H2BAQ96A08 127 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
LINC01563-201ENST00000456235 TEX46H3BTG2 121 aa9.92□□□□□ -0.82
LINC01563-201ENST00000456235 HOXA5P20719 270 aa9.92□□□□□ -0.82
LINC01563-201ENST00000456235 NKX6-2Q9C056 277 aaPredicted RBP9.92□□□□□ -0.82
LINC01563-201ENST00000456235 MANBALQ9NQG1 85 aa9.92□□□□□ -0.82
LINC01563-201ENST00000456235 TMSB15BA0A087X1C1 80 aa9.91□□□□□ -0.82
LINC01563-201ENST00000456235 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
LINC01563-201ENST00000456235 A0A0J9YY99 117 aa9.91□□□□□ -0.82
LINC01563-201ENST00000456235 M0R036 132 aa9.91□□□□□ -0.82
LINC01563-201ENST00000456235 FMC1Q96HJ9 113 aa9.91□□□□□ -0.82
LINC01563-201ENST00000456235 TRGV11A0A075B6L2 103 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 TRGV2A0A075B6R0 118 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 IGHV3-16A0A0C4DH30 117 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 SPINK4O60575 86 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 SH2D1AO60880 128 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 LTAP01374 205 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 PFN1P07737 140 aaKnown RBP9.9□□□□□ -0.82
LINC01563-201ENST00000456235 CRIP1P50238 77 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 OR5I1Q13606 314 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 SAPCD1Q5SSQ6 148 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 IBA57Q5T440 356 aaKnown RBP9.9□□□□□ -0.82
LINC01563-201ENST00000456235 LINC00612Q8N6U2 182 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 SDF2L1Q9HCN8 221 aa9.9□□□□□ -0.82
LINC01563-201ENST00000456235 VPS13DQ5THJ4 4388 aa9.89□□□□□ -0.83
LINC01563-201ENST00000456235 ATP5G1P05496 136 aa9.89□□□□□ -0.83
LINC01563-201ENST00000456235 BCL2P10415 239 aa9.89□□□□□ -0.83
LINC01563-201ENST00000456235 DAZ2Q13117 558 aaKnown RBP9.89□□□□□ -0.83
LINC01563-201ENST00000456235 PRR27Q6MZM9 219 aa9.89□□□□□ -0.83
LINC01563-201ENST00000456235 IGKV3D-20A0A0C4DH25 116 aa9.88□□□□□ -0.83
LINC01563-201ENST00000456235 RAB19A4D1S5 217 aa9.88□□□□□ -0.83
LINC01563-201ENST00000456235 GRIFINA4D1Z8 144 aa9.88□□□□□ -0.83
LINC01563-201ENST00000456235 PGPEP1LA6NFU8 196 aa9.88□□□□□ -0.83
LINC01563-201ENST00000456235 IFNA1P01562 189 aa9.88□□□□□ -0.83
LINC01563-201ENST00000456235 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
LINC01563-201ENST00000456235 RPL35P42766 123 aaKnown RBP9.88□□□□□ -0.83
LINC01563-201ENST00000456235 MEF2BQ02080 365 aaPredicted RBP9.88□□□□□ -0.83
LINC01563-201ENST00000456235 NDUFAF3Q9BU61 184 aa9.88□□□□□ -0.83
LINC01563-201ENST00000456235 TRAV26-1A0A087WT03 109 aa9.87□□□□□ -0.83
LINC01563-201ENST00000456235 FBLL1A6NHQ2 334 aaKnown RBP9.87□□□□□ -0.83
LINC01563-201ENST00000456235 C9JCJ5 164 aa9.87□□□□□ -0.83
LINC01563-201ENST00000456235 NUDT3O95989 172 aa9.87□□□□□ -0.83
LINC01563-201ENST00000456235 ORM1P02763 201 aa9.87□□□□□ -0.83
LINC01563-201ENST00000456235 RPL19P84098 196 aaKnown RBP9.87□□□□□ -0.83
LINC01563-201ENST00000456235 TDRG1Q3Y452 100 aa9.87□□□□□ -0.83
LINC01563-201ENST00000456235 CENPWQ5EE01 88 aa9.87□□□□□ -0.83
LINC01563-201ENST00000456235 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
LINC01563-201ENST00000456235 H3BVH4 76 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 CEBPGP53567 150 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 TOR2AQ5JU69 321 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 BAGE2Q86Y30 109 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 C11orf52Q96A22 123 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 MUC4Q99102 2169 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 ZFP30Q9Y2G7 519 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 KMT2AQ03164 3969 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 NACAE9PAV3 2078 aa9.86□□□□□ -0.83
LINC01563-201ENST00000456235 TRBV6-1A0A0K0K1D8 114 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 FABP5P3A8MUU1 101 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 B4DEV8 164 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 MGST1P10620 155 aaKnown RBP9.85□□□□□ -0.83
LINC01563-201ENST00000456235 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
LINC01563-201ENST00000456235 BLOC1S1P78537 153 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 ZNF674Q2M3X9 581 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 KCNS1Q96KK3 526 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 VAX2Q9UIW0 290 aa9.85□□□□□ -0.83
LINC01563-201ENST00000456235 IGHV3-73A0A0B4J1V6 119 aa9.84□□□□□ -0.83
LINC01563-201ENST00000456235 KRBOX1C9JBD0 128 aa9.84□□□□□ -0.83
LINC01563-201ENST00000456235 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 RBFOX3A6NFN3 312 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 IGLV2-8P01709 118 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 S100A4P26447 101 aaKnown RBP9.83□□□□□ -0.84
LINC01563-201ENST00000456235 ASIPP42127 132 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 LGALS9CQ6DKI2 356 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 UBE2DNLQ8IWF7 75 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 POM121L12Q8N7R1 296 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 C9orf85Q96MD7 179 aa9.83□□□□□ -0.84
LINC01563-201ENST00000456235 DNAH6Q9C0G6 4158 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 A0A096LPF7 62 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 MUC21A0A0G2JKD1 596 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 MUC21A0A140T8X8 626 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 M0R2P5 195 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 PDE6DO43924 150 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 GNG4P50150 75 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 ZNF506Q5JVG8 444 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 VSIG2Q96IQ7 327 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 SPXQ9BT56 116 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 MLST8Q9BVC4 326 aa9.82□□□□□ -0.84
LINC01563-201ENST00000456235 S100A9P06702 114 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms