RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 FMC1Q96HJ9 113 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 IGF2BP2-AS1Q96M15 143 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 TXNDC17Q9BRA2 123 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 UPK3BQ9BT76 320 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 EMC6Q9BV81 110 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 RTL8AQ9BWD3 113 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DPH3P1Q9H4G8 78 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 HEATR1Q9H583 2144 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 ZNF286AQ9HBT8 521 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DAZ1Q9NQZ3 744 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 DAZ3Q9NR90 486 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 NHP2Q9NX24 153 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 LAMTOR3Q9UHA4 124 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 RPUSD1Q9UJJ7 312 aaKnown RBP1.41□□□□□ -2.18
LINC02540-201ENST00000455554 SERP1Q9Y6X1 66 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 LY96Q9Y6Y9 160 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 V9GYV3 84 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 PLXNA3P51805 1871 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 PTPRBP23467 1997 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 PCDH15Q96QU1 1955 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 ATG2BQ96BY7 2078 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 MYO9BQ13459 2157 aa1.41□□□□□ -2.18
LINC02540-201ENST00000455554 NRXN2Q9P2S2 1712 aa1.4□□□□□ -2.18
LINC02540-201ENST00000455554 KIAA1671Q9BY89 1806 aa1.4□□□□□ -2.18
LINC02540-201ENST00000455554 ZNF236Q9UL36 1845 aa1.4□□□□□ -2.18
LINC02540-201ENST00000455554 ANAPC1Q9H1A4 1944 aa1.4□□□□□ -2.18
LINC02540-201ENST00000455554 SCN3AQ9NY46 2000 aa1.4□□□□□ -2.18
LINC02540-201ENST00000455554 OBSL1O75147 1896 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 UBR3Q6ZT12 1888 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 NUP210Q8TEM1 1887 aaPredicted RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 TRBV19A0A075B6N1 114 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 TRAV17A0A0B4J275 112 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 MYMXA0A1B0GTQ4 84 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CTXND1A0A1B0GTU2 59 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 FAM240AA0A1B0GVK7 77 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CRYM-AS1A6NIL9 109 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 KNCNA6PVL3 124 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 LOC730098B7Z3J9 87 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 C9JCJ5 164 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 C11orf94C9JXX5 98 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 LINC01619G3V211 115 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 LGALS9O00182 355 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 ATOX1O00244 68 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 PEX7O00628 323 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 SS18L1O75177 396 aaPredicted RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 NPYP01303 97 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 IL4P05112 153 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 MGST1P10620 155 aaKnown RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CCL1P22362 96 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 GCHFRP30047 84 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 MYCNOSP40205 109 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CXCL5P42830 114 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 PSMB2P49721 201 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF136P52737 540 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF138P52744 262 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CCL23P55773 120 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 UBE2D3P61077 147 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 NPC2P61916 151 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 HIST1H4AP62805 103 aaKnown RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 UBE2D2P62837 147 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 RPL30P62888 115 aaKnown RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CCL8P80075 99 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 QRFPP83859 136 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF56Q15929 161 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 LGALS9BQ3B8N2 356 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 DEFB121Q5J5C9 76 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 LGALS9CQ6DKI2 356 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CEMP1Q6PRD7 247 aaPredicted RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 C5orf38Q86SI9 138 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 PRR15Q8IV56 129 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 SLC22A24Q8N4F4 322 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 DRAM1Q8N682 238 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 C11orf72Q8NBR9 251 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 NPBQ8NG41 125 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF799Q96GE5 643 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 RNF185Q96GF1 192 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 GPX7Q96SL4 187 aaPredicted RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 MGST2Q99735 147 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 WFDC6Q9BQY6 131 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 CHAC1Q9BUX1 264 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 AICDAQ9GZX7 198 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 FAM60AQ9NP50 221 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 NXT2Q9NPJ8 142 aaKnown RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 OSTCQ9NRP0 149 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 RBM12B-AS1Q9P1G2 102 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 DEC1Q9P2X7 70 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 AMMECR1Q9Y4X0 333 aaPredicted RBP1.4□□□□□ -2.19
LINC02540-201ENST00000455554 TIMM9Q9Y5J7 89 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 PLXNB3Q9ULL4 1909 aa1.4□□□□□ -2.19
LINC02540-201ENST00000455554 KMT2EQ8IZD2 1858 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 TRBV20OR9-2A0A075B6H5 130 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 TRBV7-3A0A075B6L6 115 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 IGHV3OR15-7A0A075B7D8 119 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 TMSB15BA0A087X1C1 80 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 A0A0D9SEW6 157 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 TRBV7-6A0A0J9YX20 115 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 C19orf71A6NCJ1 209 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 PGPA6NDG6 321 aa1.39□□□□□ -2.19
LINC02540-201ENST00000455554 CPSF4LA6NMK7 179 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms