RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 LGALS9BQ3B8N2 356 aa17.3■□□□□ 0.36
MSH2-203ENST00000454849 Q6ZNX1 250 aa17.3■□□□□ 0.36
MSH2-203ENST00000454849 TMEM75Q8N9X5 138 aa17.3■□□□□ 0.36
MSH2-203ENST00000454849 SFT2D1Q8WV19 159 aa17.3■□□□□ 0.36
MSH2-203ENST00000454849 MUC4Q99102 2169 aa17.29■□□□□ 0.36
MSH2-203ENST00000454849 SFTA3P0C7M3 94 aa17.29■□□□□ 0.36
MSH2-203ENST00000454849 TDRG1Q3Y452 100 aa17.29■□□□□ 0.36
MSH2-203ENST00000454849 CST9LP1Q5W188 147 aa17.29■□□□□ 0.36
MSH2-203ENST00000454849 CCL18P55774 89 aa17.28■□□□□ 0.36
MSH2-203ENST00000454849 SMUG1Q53HV7 270 aa17.28■□□□□ 0.36
MSH2-203ENST00000454849 STOML3Q8TAV4 291 aa17.28■□□□□ 0.36
MSH2-203ENST00000454849 C18orf15Q96N68 181 aa17.28■□□□□ 0.36
MSH2-203ENST00000454849 SDF2L1Q9HCN8 221 aa17.28■□□□□ 0.36
MSH2-203ENST00000454849 BIRC6Q9NR09 4857 aa17.27■□□□□ 0.36
MSH2-203ENST00000454849 SPXQ9BT56 116 aa17.27■□□□□ 0.36
MSH2-203ENST00000454849 ARL2-SNX15V9GYD0 113 aa17.27■□□□□ 0.36
MSH2-203ENST00000454849 PAGE4O60829 102 aa17.26■□□□□ 0.35
MSH2-203ENST00000454849 LGALSLQ3ZCW2 172 aaPredicted RBP17.26■□□□□ 0.35
MSH2-203ENST00000454849 ZNF479Q96JC4 524 aa17.26■□□□□ 0.35
MSH2-203ENST00000454849 PAX4O43316 350 aa17.25■□□□□ 0.35
MSH2-203ENST00000454849 FHL2Q14192 279 aa17.25■□□□□ 0.35
MSH2-203ENST00000454849 ESRGQ1W209 222 aa17.25■□□□□ 0.35
MSH2-203ENST00000454849 ZFP69Q49AA0 526 aa17.25■□□□□ 0.35
MSH2-203ENST00000454849 Q6ZR54 194 aa17.25■□□□□ 0.35
MSH2-203ENST00000454849 ZNRF2Q8NHG8 242 aa17.25■□□□□ 0.35
MSH2-203ENST00000454849 A0A096LPF7 62 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 UMAD1C9J7I0 102 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 PFN1P07737 140 aaKnown RBP17.24■□□□□ 0.35
MSH2-203ENST00000454849 PPT1P50897 306 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 SAPCD1Q5SSQ6 148 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 Q86TA4 180 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 TCTE3Q8IZS6 198 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 MBD3L1Q8WWY6 194 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 RASL10AQ92737 203 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 KCNS1Q96KK3 526 aa17.24■□□□□ 0.35
MSH2-203ENST00000454849 NKX6-2Q9C056 277 aaPredicted RBP17.24■□□□□ 0.35
MSH2-203ENST00000454849 TRGV4A0A0C4DH28 118 aa17.23■□□□□ 0.35
MSH2-203ENST00000454849 C9JCJ5 164 aa17.23■□□□□ 0.35
MSH2-203ENST00000454849 M0R2P5 195 aa17.23■□□□□ 0.35
MSH2-203ENST00000454849 RTL8CO15255 209 aa17.23■□□□□ 0.35
MSH2-203ENST00000454849 TPT1P13693 172 aaKnown RBP17.23■□□□□ 0.35
MSH2-203ENST00000454849 HHLA3Q9XRX5 114 aa17.23■□□□□ 0.35
MSH2-203ENST00000454849 EIF5AP63241 154 aaKnown RBP17.22■□□□□ 0.35
MSH2-203ENST00000454849 HIST1H2BAQ96A08 127 aa17.22■□□□□ 0.35
MSH2-203ENST00000454849 FBLL1A6NHQ2 334 aaKnown RBP17.21■□□□□ 0.35
MSH2-203ENST00000454849 H3BNG1 76 aa17.21■□□□□ 0.35
MSH2-203ENST00000454849 H2AFB1P0C5Y9 115 aa17.21■□□□□ 0.35
MSH2-203ENST00000454849 CRYBA4P53673 196 aa17.21■□□□□ 0.35
MSH2-203ENST00000454849 FAM3BP58499 235 aaPredicted RBP17.21■□□□□ 0.35
MSH2-203ENST00000454849 OR4C5Q8NGB2 326 aa17.2■□□□□ 0.34
MSH2-203ENST00000454849 ZC2HC1AQ96GY0 325 aa17.2■□□□□ 0.34
MSH2-203ENST00000454849 PRO0255Q9UI72 69 aa17.2■□□□□ 0.34
MSH2-203ENST00000454849 CCL20P78556 96 aa17.19■□□□□ 0.34
MSH2-203ENST00000454849 IGKV3D-20A0A0C4DH25 116 aa17.18■□□□□ 0.34
MSH2-203ENST00000454849 CRIP1P50238 77 aa17.18■□□□□ 0.34
MSH2-203ENST00000454849 UBE2G1P62253 170 aa17.18■□□□□ 0.34
MSH2-203ENST00000454849 DPPA3Q6W0C5 159 aa17.18■□□□□ 0.34
MSH2-203ENST00000454849 ICOSQ9Y6W8 199 aa17.18■□□□□ 0.34
MSH2-203ENST00000454849 NBDYA0A0U1RRE5 68 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 FABP5P3A8MUU1 101 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 C1QBP02746 253 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 AKR1C3P42330 323 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 ZNF876PQ49A33 203 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 AKAP14Q86UN6 197 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 NHLRC2Q8NBF2 726 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 FMC1Q96HJ9 113 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 Q9H8V8 135 aa17.17■□□□□ 0.34
MSH2-203ENST00000454849 TRAV4A0A0B4J268 109 aa17.16■□□□□ 0.34
MSH2-203ENST00000454849 SCO2A0A1W2PP80 73 aa17.16■□□□□ 0.34
MSH2-203ENST00000454849 M0R036 132 aa17.16■□□□□ 0.34
MSH2-203ENST00000454849 ORM1P02763 201 aa17.16■□□□□ 0.34
MSH2-203ENST00000454849 IGHV3-73A0A0B4J1V6 119 aa17.15■□□□□ 0.34
MSH2-203ENST00000454849 PGPEP1LA6NFU8 196 aa17.15■□□□□ 0.34
MSH2-203ENST00000454849 PRSS29PA6NIE9 313 aa17.15■□□□□ 0.34
MSH2-203ENST00000454849 RNASE3P12724 160 aaKnown RBP17.15■□□□□ 0.34
MSH2-203ENST00000454849 SLAQ13239 276 aa17.15■□□□□ 0.34
MSH2-203ENST00000454849 C1orf134Q5TEV5 83 aa17.15■□□□□ 0.34
MSH2-203ENST00000454849 C9orf85Q96MD7 179 aa17.15■□□□□ 0.34
MSH2-203ENST00000454849 DNAH2Q9P225 4427 aa17.14■□□□□ 0.33
MSH2-203ENST00000454849 LOC100131303A0A0U1RQF7 123 aa17.14■□□□□ 0.33
MSH2-203ENST00000454849 SH2D1AO60880 128 aa17.14■□□□□ 0.33
MSH2-203ENST00000454849 GYPEP15421 78 aa17.14■□□□□ 0.33
MSH2-203ENST00000454849 LINC00336Q6ZUF6 198 aa17.14■□□□□ 0.33
MSH2-203ENST00000454849 GNG13Q9P2W3 67 aa17.14■□□□□ 0.33
MSH2-203ENST00000454849 ZFP30Q9Y2G7 519 aa17.14■□□□□ 0.33
MSH2-203ENST00000454849 MRPS16Q9Y3D3 137 aaKnown RBP17.14■□□□□ 0.33
MSH2-203ENST00000454849 TMSB15BA0A087X1C1 80 aa17.13■□□□□ 0.33
MSH2-203ENST00000454849 GRIFINA4D1Z8 144 aa17.13■□□□□ 0.33
MSH2-203ENST00000454849 B4DEV8 164 aa17.13■□□□□ 0.33
MSH2-203ENST00000454849 S100A4P26447 101 aaKnown RBP17.13■□□□□ 0.33
MSH2-203ENST00000454849 LTAP01374 205 aa17.12■□□□□ 0.33
MSH2-203ENST00000454849 ZNF506Q5JVG8 444 aa17.12■□□□□ 0.33
MSH2-203ENST00000454849 A0A1B0GVG6 124 aa17.11■□□□□ 0.33
MSH2-203ENST00000454849 K7EQD1 137 aa17.11■□□□□ 0.33
MSH2-203ENST00000454849 MRPL23Q16540 153 aaKnown RBP17.11■□□□□ 0.33
MSH2-203ENST00000454849 FAM162BQ5T6X4 162 aa17.11■□□□□ 0.33
MSH2-203ENST00000454849 CFAP126Q5VTH2 177 aa17.11■□□□□ 0.33
MSH2-203ENST00000454849 TCEAL7Q9BRU2 100 aa17.11■□□□□ 0.33
MSH2-203ENST00000454849 KRTAP1-5Q9BYS1 174 aa17.11■□□□□ 0.33
MSH2-203ENST00000454849 KRBOX1C9JBD0 128 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms