RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 SIX6O95475 246 aa15.94■□□□□ 0.14
LYSMD2-202ENST00000454181 PFN1P07737 140 aaKnown RBP15.94■□□□□ 0.14
LYSMD2-202ENST00000454181 OR10J3Q5JRS4 329 aa15.94■□□□□ 0.14
LYSMD2-202ENST00000454181 FFAR4Q5NUL3 377 aa15.94■□□□□ 0.14
LYSMD2-202ENST00000454181 Q9HAA7 133 aa15.94■□□□□ 0.14
LYSMD2-202ENST00000454181 IBA57-AS1B1ANH7 110 aa15.93■□□□□ 0.14
LYSMD2-202ENST00000454181 LINC01556Q5JQF7 62 aa15.93■□□□□ 0.14
LYSMD2-202ENST00000454181 NMES1Q9C002 83 aa15.93■□□□□ 0.14
LYSMD2-202ENST00000454181 SDF2L1Q9HCN8 221 aa15.93■□□□□ 0.14
LYSMD2-202ENST00000454181 OTORQ9NRC9 128 aa15.93■□□□□ 0.14
LYSMD2-202ENST00000454181 LRCOL1A6NCL2 159 aa15.92■□□□□ 0.14
LYSMD2-202ENST00000454181 PGPA6NDG6 321 aa15.92■□□□□ 0.14
LYSMD2-202ENST00000454181 J3QL48 77 aa15.92■□□□□ 0.14
LYSMD2-202ENST00000454181 CYCSP99999 105 aaKnown RBP15.92■□□□□ 0.14
LYSMD2-202ENST00000454181 Q8N814 137 aa15.92■□□□□ 0.14
LYSMD2-202ENST00000454181 SCGB1C1Q8TD33 95 aa15.92■□□□□ 0.14
LYSMD2-202ENST00000454181 KCNS1Q96KK3 526 aa15.92■□□□□ 0.14
LYSMD2-202ENST00000454181 FBLL1A6NHQ2 334 aaKnown RBP15.91■□□□□ 0.14
LYSMD2-202ENST00000454181 GATA1P15976 413 aaPredicted RBP15.91■□□□□ 0.14
LYSMD2-202ENST00000454181 PRADC1Q9BSG0 188 aa15.91■□□□□ 0.14
LYSMD2-202ENST00000454181 TREM1Q9NP99 234 aa15.91■□□□□ 0.14
LYSMD2-202ENST00000454181 MBD2Q9UBB5 411 aa15.91■□□□□ 0.14
LYSMD2-202ENST00000454181 GOLT1AQ6ZVE7 132 aa15.9■□□□□ 0.14
LYSMD2-202ENST00000454181 VPS13BQ7Z7G8 4022 aa15.89■□□□□ 0.13
LYSMD2-202ENST00000454181 TYMSP04818 313 aa15.89■□□□□ 0.13
LYSMD2-202ENST00000454181 ASB13Q8WXK3 278 aa15.89■□□□□ 0.13
LYSMD2-202ENST00000454181 MYCBP2O75592 4640 aa15.89■□□□□ 0.13
LYSMD2-202ENST00000454181 F6UZH7 168 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 H0YIZ8 118 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 IGHV3-30P01768 117 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 IGHV3-33P01772 117 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 IGHV3-30-3P0DP02 117 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 IGHV3-30-5P0DP03 117 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 SLC25A29Q8N8R3 303 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 ENKURQ8TC29 256 aa15.88■□□□□ 0.13
LYSMD2-202ENST00000454181 CIDEAO60543 219 aa15.87■□□□□ 0.13
LYSMD2-202ENST00000454181 RHOHQ15669 191 aa15.87■□□□□ 0.13
LYSMD2-202ENST00000454181 ZNF876PQ49A33 203 aa15.87■□□□□ 0.13
LYSMD2-202ENST00000454181 ARL6IP6Q8N6S5 226 aa15.87■□□□□ 0.13
LYSMD2-202ENST00000454181 TM2D2Q9BX73 214 aa15.87■□□□□ 0.13
LYSMD2-202ENST00000454181 A0A1W2PPV4 95 aa15.86■□□□□ 0.13
LYSMD2-202ENST00000454181 NDFIP1Q9BT67 221 aa15.86■□□□□ 0.13
LYSMD2-202ENST00000454181 NDUFA13Q9P0J0 144 aa15.86■□□□□ 0.13
LYSMD2-202ENST00000454181 TRBV6-4A0A1B0GX49 114 aa15.85■□□□□ 0.13
LYSMD2-202ENST00000454181 EIF3GO75821 320 aaKnown RBP eCLIP15.85■□□□□ 0.13
LYSMD2-202ENST00000454181 LELP1Q5T871 98 aa15.85■□□□□ 0.13
LYSMD2-202ENST00000454181 SMIM3Q9BZL3 60 aa15.85■□□□□ 0.13
LYSMD2-202ENST00000454181 HSPB11Q9Y547 144 aa15.85■□□□□ 0.13
LYSMD2-202ENST00000454181 TRAV8-1A0A0A6YYK1 113 aa15.84■□□□□ 0.13
LYSMD2-202ENST00000454181 C1QBP02746 253 aa15.84■□□□□ 0.13
LYSMD2-202ENST00000454181 PLA2G1BP04054 148 aaKnown RBP15.84■□□□□ 0.13
LYSMD2-202ENST00000454181 ASAH1Q13510 395 aa15.84■□□□□ 0.13
LYSMD2-202ENST00000454181 ACOT6Q3I5F7 207 aaPredicted RBP15.84■□□□□ 0.13
LYSMD2-202ENST00000454181 PQLC2Q6ZP29 291 aa15.84■□□□□ 0.13
LYSMD2-202ENST00000454181 PPP1R1CQ8WVI7 109 aa15.84■□□□□ 0.13
LYSMD2-202ENST00000454181 IGHV3-73A0A0B4J1V6 119 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 RS1O15537 224 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 PET100P0DJ07 73 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 CFAP126Q5VTH2 177 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 ATP6V0E2Q8NHE4 81 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 TVP23CQ96ET8 276 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 GTSF1LQ9H1H1 148 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 SH3BGRL3Q9H299 93 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 FAM30AQ9NZY2 134 aa15.83■□□□□ 0.12
LYSMD2-202ENST00000454181 LAGE3Q14657 143 aa15.82■□□□□ 0.12
LYSMD2-202ENST00000454181 TAAR5O14804 337 aa15.8■□□□□ 0.12
LYSMD2-202ENST00000454181 MGST1P10620 155 aaKnown RBP15.8■□□□□ 0.12
LYSMD2-202ENST00000454181 RPL12P30050 165 aaKnown RBP15.8■□□□□ 0.12
LYSMD2-202ENST00000454181 GNG5P63218 68 aa15.8■□□□□ 0.12
LYSMD2-202ENST00000454181 SGK494Q96LW2 274 aa15.8■□□□□ 0.12
LYSMD2-202ENST00000454181 SERTM2A0A1B0GWG4 89 aa15.79■□□□□ 0.12
LYSMD2-202ENST00000454181 K7EQM0 130 aa15.79■□□□□ 0.12
LYSMD2-202ENST00000454181 S100ZQ8WXG8 99 aa15.79■□□□□ 0.12
LYSMD2-202ENST00000454181 TRAV8-3A0A0A6YYJ7 113 aa15.78■□□□□ 0.12
LYSMD2-202ENST00000454181 INMT-MINDY4F8WBC2 141 aa15.78■□□□□ 0.12
LYSMD2-202ENST00000454181 MPC2O95563 127 aa15.78■□□□□ 0.12
LYSMD2-202ENST00000454181 H2BFSP57053 126 aa15.78■□□□□ 0.12
LYSMD2-202ENST00000454181 HMGB3O15347 200 aaKnown RBP15.77■□□□□ 0.12
LYSMD2-202ENST00000454181 SSNA1O43805 119 aa15.77■□□□□ 0.12
LYSMD2-202ENST00000454181 ZFP69Q49AA0 526 aa15.77■□□□□ 0.12
LYSMD2-202ENST00000454181 TOR2AQ5JU69 321 aa15.77■□□□□ 0.12
LYSMD2-202ENST00000454181 DPPA3Q6W0C5 159 aa15.77■□□□□ 0.12
LYSMD2-202ENST00000454181 LINC00299Q6ZSB3 139 aa15.77■□□□□ 0.12
LYSMD2-202ENST00000454181 GCGP01275 180 aa15.76■□□□□ 0.11
LYSMD2-202ENST00000454181 RAB2AP61019 212 aa15.76■□□□□ 0.11
LYSMD2-202ENST00000454181 OR10G9Q8NGN4 311 aa15.76■□□□□ 0.11
LYSMD2-202ENST00000454181 OR10G7Q8NGN6 311 aa15.76■□□□□ 0.11
LYSMD2-202ENST00000454181 ZNF506Q5JVG8 444 aa15.75■□□□□ 0.11
LYSMD2-202ENST00000454181 LINC00528Q8N1L1 170 aa15.75■□□□□ 0.11
LYSMD2-202ENST00000454181 C9orf85Q96MD7 179 aa15.75■□□□□ 0.11
LYSMD2-202ENST00000454181 PGPEP1LA6NFU8 196 aa15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 LECT2O14960 151 aa15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 ZNF80P51504 273 aaPredicted RBP15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 C5orf17Q8NAS9 161 aa15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 DEFB104AQ8WTQ1 72 aa15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 PTH2Q96A98 100 aa15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 C11orf21Q9P2W6 132 aa15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 PSG8Q9UQ74 426 aa15.74■□□□□ 0.11
LYSMD2-202ENST00000454181 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.73■□□□□ 0.11
LYSMD2-202ENST00000454181 GAGE12JA6NER3 117 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms