RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CDK2AP2O75956 126 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 IGHV1-8P0DP01 117 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 ATP5G2Q06055 141 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 Q0VG73 95 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 SRSF9Q13242 221 aaKnown RBP eCLIP5.92□□□□□ -1.46
BRCC3-208ENST00000453705 VMA21Q3ZAQ7 101 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 C2orf83Q53S99 150 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 RPL39P5Q59GN2 51 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 VSTM2AQ8TAG5 236 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 SCGB1C1Q8TD33 95 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 NABP2Q9BQ15 211 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 UTP20O75691 2785 aaKnown RBP5.91□□□□□ -1.46
BRCC3-208ENST00000453705 A0A1B0GV50 99 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 HINT1P49773 126 aaPredicted RBP5.91□□□□□ -1.46
BRCC3-208ENST00000453705 FAM53AQ6NSI3 398 aaPredicted RBP5.91□□□□□ -1.46
BRCC3-208ENST00000453705 TTC9CQ8N5M4 171 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 OR10P1Q8NGE3 313 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 UBALD1Q8TB05 177 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 TP53TG3Q9ULZ0 132 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 TRAPPC1Q9Y5R8 145 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 TRAV8-3A0A0A6YYJ7 113 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 OOSP1A8MZH6 123 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 C17orf112F2Z3M2 114 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 KRASP01116 189 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 OPRK1P41145 380 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 LINC00310P59036 64 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
BRCC3-208ENST00000453705 KLK9Q2XQG4 91 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 LYPD2Q6UXB3 125 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 NEUROG1Q92886 237 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 TXNDC17Q9BRA2 123 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 KLK9Q9UKQ9 250 aa5.91□□□□□ -1.46
BRCC3-208ENST00000453705 SPENQ96T58 3664 aaKnown RBP5.91□□□□□ -1.46
BRCC3-208ENST00000453705 DIRC3C9JPN6 131 aa5.9□□□□□ -1.46
BRCC3-208ENST00000453705 TMEM250H0YL14 139 aa5.9□□□□□ -1.46
BRCC3-208ENST00000453705 CST7O76096 145 aa5.9□□□□□ -1.46
BRCC3-208ENST00000453705 IGLV2-23P01705 113 aa5.9□□□□□ -1.46
BRCC3-208ENST00000453705 LMO4P61968 165 aa5.9□□□□□ -1.46
BRCC3-208ENST00000453705 CTXND1A0A1B0GTU2 59 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 ODF3BA8MYP8 253 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 IAPPP10997 89 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 DAD1P61803 113 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 C6orf99Q4VX62 202 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 OR8B3Q8NGG8 313 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 OR8B2Q96RD0 313 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 GNB4Q9HAV0 340 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 TP73-AS1Q9UF72 201 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 TEX15Q9BXT5 2789 aa5.9□□□□□ -1.47
BRCC3-208ENST00000453705 LRRK2Q5S007 2527 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 CRISP2P16562 243 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 LOXL1Q08397 574 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-208ENST00000453705 Q6AWC8 147 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 NDUFA4L2Q9NRX3 87 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 ZNF706Q9Y5V0 76 aaPredicted RBP5.89□□□□□ -1.47
BRCC3-208ENST00000453705 TRAV9-1A0A075B6T8 112 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 ZNF253O75346 499 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 PMCHL1Q16048 86 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 SPANXN5Q5MJ07 72 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 UFSP1Q6NVU6 142 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 SCGB1D4Q6XE38 83 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 C17orf77Q96MU5 243 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 NPCDR1Q9BY65 106 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 MRPL20Q9BYC9 149 aaKnown RBP5.89□□□□□ -1.47
BRCC3-208ENST00000453705 PARLQ9H300 379 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 MDFICQ9P1T7 246 aa5.89□□□□□ -1.47
BRCC3-208ENST00000453705 COL6A6A6NMZ7 2263 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 CEBPZOSA8MTT3 80 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 M0R381 172 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 CD5LO43866 347 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 COL8A2P25067 703 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 ADIRFQ15847 76 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 MRGPRG-AS1Q2M3A8 158 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 DEFB108BQ8NET1 73 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 CLEC7AQ9BXN2 247 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 RPRMQ9NS64 109 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 GNG13Q9P2W3 67 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 DOCK11Q5JSL3 2073 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 C19orf84I3L1E1 186 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 TCRAP04437 139 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 IFITM1P13164 125 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 MFAP2P55001 183 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 EBI3Q14213 229 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 Q6ZUT4 128 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 SMIM7Q9BQ49 75 aa5.88□□□□□ -1.47
BRCC3-208ENST00000453705 PTPN13Q12923 2485 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 A6NDN8 102 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 OR2T8A6NH00 312 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 CCL3L1P16619 93 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 PSMB3P49720 205 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 ERCC8Q13216 396 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 MINOS1Q5TGZ0 78 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 MRPL54Q6P161 138 aaKnown RBP5.87□□□□□ -1.47
BRCC3-208ENST00000453705 SIGLECL1Q8N7X8 197 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 C21orf62Q9NYP8 219 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 KLK5Q9Y337 293 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-208ENST00000453705 MINOS1-NBL1R4GNA1 71 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 BUB1B-PAK6H3BSN5 160 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 SERF1AO75920 110 aa5.87□□□□□ -1.47
BRCC3-208ENST00000453705 FRMD6-AS1P0C7T7 363 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms