RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ORM2P19652 201 aa12.15□□□□□ -0.46
SNX17-204ENST00000453453 TRAV8-6A0A0B4J262 113 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 K7EQM0 130 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 FGF6P10767 208 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 S100A7P31151 101 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 RNF125Q96EQ8 232 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 AP1S3Q96PC3 154 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 U3KQK5 164 aa12.15□□□□□ -0.47
SNX17-204ENST00000453453 A0A087X0K7 114 aa12.14□□□□□ -0.47
SNX17-204ENST00000453453 GAGE10A6NGK3 116 aa12.14□□□□□ -0.47
SNX17-204ENST00000453453 IGLV2-11P01706 119 aa12.14□□□□□ -0.47
SNX17-204ENST00000453453 IL4P05112 153 aa12.14□□□□□ -0.47
SNX17-204ENST00000453453 LGALS1P09382 135 aaKnown RBP12.14□□□□□ -0.47
SNX17-204ENST00000453453 CT45A10P0DMU9 189 aa12.14□□□□□ -0.47
SNX17-204ENST00000453453 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
SNX17-204ENST00000453453 RPH3ALQ9UNE2 315 aa12.14□□□□□ -0.47
SNX17-204ENST00000453453 SERTM2A0A1B0GWG4 89 aa12.13□□□□□ -0.47
SNX17-204ENST00000453453 WI2-2373I1.2A0A1W2PRP0 233 aa12.13□□□□□ -0.47
SNX17-204ENST00000453453 K7EP34 96 aa12.13□□□□□ -0.47
SNX17-204ENST00000453453 SRSF2Q01130 221 aaKnown RBP12.12□□□□□ -0.47
SNX17-204ENST00000453453 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
SNX17-204ENST00000453453 PRSS3P2Q8NHM4 247 aa12.12□□□□□ -0.47
SNX17-204ENST00000453453 WFDC12Q8WWY7 111 aa12.12□□□□□ -0.47
SNX17-204ENST00000453453 IGHV3-35A0A0C4DH35 117 aa12.11□□□□□ -0.47
SNX17-204ENST00000453453 FBLL1A6NHQ2 334 aaKnown RBP12.11□□□□□ -0.47
SNX17-204ENST00000453453 SMIM17P0DL12 118 aa12.11□□□□□ -0.47
SNX17-204ENST00000453453 FER1L6-AS1Q8NA97 138 aa12.11□□□□□ -0.47
SNX17-204ENST00000453453 NDUFA4O00483 81 aa12.11□□□□□ -0.47
SNX17-204ENST00000453453 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
SNX17-204ENST00000453453 C4orf3Q8WVX3 66 aa12.11□□□□□ -0.47
SNX17-204ENST00000453453 RABAC1Q9UI14 185 aa12.11□□□□□ -0.47
SNX17-204ENST00000453453 PROK1P58294 105 aa12.1□□□□□ -0.47
SNX17-204ENST00000453453 TCTEX1D4Q5JR98 221 aa12.1□□□□□ -0.47
SNX17-204ENST00000453453 PRNTQ86SH4 94 aa12.1□□□□□ -0.47
SNX17-204ENST00000453453 SLC25A39Q9BZJ4 359 aaPredicted RBP12.1□□□□□ -0.47
SNX17-204ENST00000453453 TP73-AS1Q9UF72 201 aa12.1□□□□□ -0.47
SNX17-204ENST00000453453 ARMS2P0C7Q2 107 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 CD28P10747 220 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 FAM106AQ4KMX7 169 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 GOLT1AQ6ZVE7 132 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 NEGR1Q7Z3B1 354 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 KLHL30-AS1Q8NEE0 82 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 SGK494Q96LW2 274 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 ZFAND3Q9H8U3 227 aa12.09□□□□□ -0.47
SNX17-204ENST00000453453 TSSC4Q9Y5U2 329 aaPredicted RBP12.09□□□□□ -0.47
SNX17-204ENST00000453453 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 G3V4G9 280 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 PSG3Q16557 428 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.08□□□□□ -0.48
SNX17-204ENST00000453453 METTL26Q96S19 204 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 SHANK2-AS3Q9BTD1 123 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 PSG8Q9UQ74 426 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 NF1P21359 2839 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 H3BRN7 92 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 HBDP02042 147 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 PDE6HQ13956 83 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 GPHB5Q86YW7 130 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 C11orf44Q8N8P7 122 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 ZC2HC1AQ96GY0 325 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 HIGD1BQ9P298 99 aa12.08□□□□□ -0.48
SNX17-204ENST00000453453 CSN3P07498 182 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 ZNF138P52744 262 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 ERASQ7Z444 233 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 ORMDL3Q8N138 153 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 OR2K2Q8NGT1 345 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 CITED2Q99967 270 aaPredicted RBP12.07□□□□□ -0.48
SNX17-204ENST00000453453 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
SNX17-204ENST00000453453 C2CD3Q4AC94 2353 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 A0A087WW49 117 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 A0A096LNJ9 63 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 ZNF785A8K8V0 405 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 LINC01619G3V211 115 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 KIR3DS1Q14943 382 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 SIGLEC8Q9NYZ4 499 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 UFC1Q9Y3C8 167 aa12.06□□□□□ -0.48
SNX17-204ENST00000453453 CUBNO60494 3623 aa12.05□□□□□ -0.48
SNX17-204ENST00000453453 NCR2O95944 276 aa12.05□□□□□ -0.48
SNX17-204ENST00000453453 SIGLEC15Q6ZMC9 328 aa12.05□□□□□ -0.48
SNX17-204ENST00000453453 C18orf65Q6ZTR6 163 aa12.05□□□□□ -0.48
SNX17-204ENST00000453453 ZNF414Q96IQ9 312 aa12.05□□□□□ -0.48
SNX17-204ENST00000453453 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
SNX17-204ENST00000453453 TEP1Q99973 2627 aaKnown RBP12.05□□□□□ -0.48
SNX17-204ENST00000453453 A0A1W2PRX2 142 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 HOXD3P31249 432 aaPredicted RBP12.04□□□□□ -0.48
SNX17-204ENST00000453453 OR11H1Q8NG94 326 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 CHTOPQ9Y3Y2 248 aaKnown RBP12.04□□□□□ -0.48
SNX17-204ENST00000453453 TRAV8-1A0A0A6YYK1 113 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 A0A1W2PPM0 123 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 TMEM238C9JI98 176 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 H0Y8G0 127 aa12.04□□□□□ -0.48
SNX17-204ENST00000453453 SCGB1A1P11684 91 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms