RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 FXYD7P58549 80 aa4.41□□□□□ -1.7
SDC4P-201ENST00000453285 RPS20P60866 119 aaKnown RBP4.41□□□□□ -1.7
SDC4P-201ENST00000453285 RBMY1FQ15415 496 aaKnown RBP4.41□□□□□ -1.7
SDC4P-201ENST00000453285 SPINK13Q1W4C9 94 aa4.41□□□□□ -1.7
SDC4P-201ENST00000453285 GFI1BQ5VTD9 330 aa4.41□□□□□ -1.7
SDC4P-201ENST00000453285 TRPT1Q86TN4 253 aaKnown RBP4.41□□□□□ -1.7
SDC4P-201ENST00000453285 BTF3L4Q96K17 158 aa4.41□□□□□ -1.7
SDC4P-201ENST00000453285 PGLYRP4Q96LB8 373 aa4.41□□□□□ -1.7
SDC4P-201ENST00000453285 MCRIP2Q9BUT9 160 aaKnown RBP4.41□□□□□ -1.7
SDC4P-201ENST00000453285 WFDC10AQ9H1F0 79 aa4.41□□□□□ -1.7
SDC4P-201ENST00000453285 TRAV12-3A0A0B4J271 114 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 GRIFINA4D1Z8 144 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 GNRH2O43555 120 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 SPINK4O60575 86 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 TSPOP30536 169 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 CTRLP40313 264 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 RPS10P46783 165 aaKnown RBP4.4□□□□□ -1.71
SDC4P-201ENST00000453285 ANXA2RQ3ZCQ2 193 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 DNLZQ5SXM8 178 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 LYZL1Q6UWQ5 148 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 TMEM136Q6ZRR5 245 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 Q8N1Y9 231 aa4.4□□□□□ -1.71
SDC4P-201ENST00000453285 SSBP4Q9BWG4 385 aaPredicted RBP4.4□□□□□ -1.71
SDC4P-201ENST00000453285 XKRY2A2RUG3 117 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 SNAI2O43623 268 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 TRGC2P03986 189 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
SDC4P-201ENST00000453285 ARMS2P0C7Q2 107 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 TDRG1Q3Y452 100 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 MUC21Q5SSG8 566 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 MRPL54Q6P161 138 aaKnown RBP4.39□□□□□ -1.71
SDC4P-201ENST00000453285 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 ATP5L2Q7Z4Y8 100 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 STHQ8IWL8 128 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 DEFB125Q8N687 156 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 FER1L6-AS1Q8NA97 138 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 GATD1Q8NB37 220 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 MDFIQ99750 246 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 GNB1LQ9BYB4 327 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 CNFNQ9BYD5 112 aa4.39□□□□□ -1.71
SDC4P-201ENST00000453285 IGHV4-4A0A075B6R2 117 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 IGHV1OR15-1A0A075B7D0 117 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 A0A1B0GUT8 65 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 C1orf196B1AJZ1 125 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 F2Z2F3 143 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 AMBPP02760 352 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 OR5AL1P0C617 328 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 MED14OSP0DP75 135 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 RNASE3P12724 160 aaKnown RBP4.38□□□□□ -1.71
SDC4P-201ENST00000453285 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 RIGQ13278 110 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 COX19Q49B96 90 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 OXLD1Q5BKU9 147 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 WDR73Q6P4I2 378 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 C1orf158Q8N1D5 194 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 FRZBQ92765 325 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 KCNS1Q96KK3 526 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 C20orf144Q9BQM9 153 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 LINC00467Q9BRT7 94 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 SCRT2Q9NQ03 307 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 MSRB1Q9NZV6 116 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 NAGKQ9UJ70 344 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 TP53TG3Q9ULZ0 132 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 TMA7Q9Y2S6 64 aaKnown RBP4.38□□□□□ -1.71
SDC4P-201ENST00000453285 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
SDC4P-201ENST00000453285 NBEAL1Q6ZS30 2694 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 IGHV3-16A0A0C4DH30 117 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 MUC21A0A0G2JKD1 596 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 MUC21A0A140T8X8 626 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 H3BVH4 76 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 SPRY2O43597 315 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 MT-ND6P03923 174 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 PRM2P04554 102 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 TRGC1P0CF51 173 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 RPL35AP18077 110 aaKnown RBP4.37□□□□□ -1.71
SDC4P-201ENST00000453285 NTF3P20783 257 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 ASIPP42127 132 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 CAMPP49913 170 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 KRTAP10-11P60412 298 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 HBBP68871 147 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 EGFEM1PQ0D2K5 195 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 PRR31Q5SQ13 230 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 FAM159AQ6UWV7 190 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 ZNF493Q6ZR52 646 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 GTSCR1Q86UQ5 136 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 ZFP82Q8N141 532 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 CSNK1G2-AS1Q8NCQ2 148 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 OR10AG1Q8NH19 301 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 C9orf85Q96MD7 179 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 TPPP3Q9BW30 176 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 MRPL18Q9H0U6 180 aaKnown RBP4.37□□□□□ -1.71
SDC4P-201ENST00000453285 MDFICQ9P1T7 246 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 XCL2Q9UBD3 114 aa4.37□□□□□ -1.71
SDC4P-201ENST00000453285 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
SDC4P-201ENST00000453285 A0A1B0GW15 77 aa4.36□□□□□ -1.71
SDC4P-201ENST00000453285 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
SDC4P-201ENST00000453285 INSP01308 110 aa4.36□□□□□ -1.71
SDC4P-201ENST00000453285 HLA-DQA1P01909 254 aa4.36□□□□□ -1.71
SDC4P-201ENST00000453285 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms