RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ZNF706Q9Y5V0 76 aaPredicted RBP2.71□□□□□ -1.98
LINC00393-202ENST00000452852 KMT2AQ03164 3969 aa2.71□□□□□ -1.98
LINC00393-202ENST00000452852 STAB2Q8WWQ8 2551 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 IGKV3-7A0A075B6H7 116 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 IGHV3OR16-8A0A075B7F1 116 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 TRAV14DV4A0A0A6YYC5 116 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 IGHV3-21A0A0B4J1V1 117 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 TRAV3A0A0B4J244 114 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 TEX50A0A1B0GTY4 177 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 SMIM31A0A1B0GVY4 71 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 GPR31O00270 319 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 GNG7O60262 68 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 PGLYRP1O75594 196 aaPredicted RBP2.7□□□□□ -1.98
LINC00393-202ENST00000452852 IFNA4P05014 189 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 S100A6P06703 90 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 CTSDP07339 412 aaPredicted RBP2.7□□□□□ -1.98
LINC00393-202ENST00000452852 SEC11BP0C7V7 166 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 LPAR6P43657 344 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 EIF2B2P49770 351 aaKnown RBP2.7□□□□□ -1.98
LINC00393-202ENST00000452852 WT1-ASQ06250 92 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 NEDD8Q15843 81 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 KLK9Q2XQG4 91 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 SLC25A29Q8N8R3 303 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 GATD1Q8NB37 220 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 OR1P1Q8NH06 330 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 OR11H2Q8NH07 326 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 RNASE11Q8TAA1 199 aaKnown RBP2.7□□□□□ -1.98
LINC00393-202ENST00000452852 SLC25A46Q96AG3 418 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 PDCD10Q9BUL8 212 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 SND1-IT1Q9HBX3 110 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 ENY2Q9NPA8 101 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 NDUFA4L2Q9NRX3 87 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 KLK9Q9UKQ9 250 aa2.7□□□□□ -1.98
LINC00393-202ENST00000452852 CORTO00230 105 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 SCO1O75880 301 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 CCNKO75909 580 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 ATG12O94817 140 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 MT-CO2P00403 227 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 IFNA17P01571 189 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 TGFBR1P36897 503 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 SNCAP37840 140 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 AKR1C2P52895 323 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 TAS2R20P59543 309 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 FAM231DQ6ZW35 169 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 TCF24Q7RTU0 167 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 SLC35G3Q8N808 338 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 YIPF6Q96EC8 236 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 RHPN1-AS1Q9BWJ2 59 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 PARD6GQ9BYG4 376 aaPredicted RBP2.69□□□□□ -1.98
LINC00393-202ENST00000452852 FXYD6Q9H0Q3 95 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 TMEM14BQ9NUH8 114 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 SMPXQ9UHP9 88 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 DNAH6Q9C0G6 4158 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 NACAE9PAV3 2078 aa2.69□□□□□ -1.98
LINC00393-202ENST00000452852 PGPA6NDG6 321 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 I3L2K1 104 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 K7EIM0 57 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 CTSGP08311 255 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 NPPCP23582 126 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 RCVRNP35243 200 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 TCTAP57738 103 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 DEFB131AP59861 70 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 HSPE1P61604 102 aaKnown RBP2.68□□□□□ -1.98
LINC00393-202ENST00000452852 LSM3P62310 102 aaKnown RBP2.68□□□□□ -1.98
LINC00393-202ENST00000452852 PRCDQ00LT1 54 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 RNASE10Q5GAN6 216 aaKnown RBP2.68□□□□□ -1.98
LINC00393-202ENST00000452852 Q5W150 140 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 LGALS9CQ6DKI2 356 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 MORN3Q6PF18 240 aaPredicted RBP2.68□□□□□ -1.98
LINC00393-202ENST00000452852 SNX29P2Q8IUI4 249 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 ORMDL3Q8N138 153 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 ANAPC13Q9BS18 74 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 MS4A6AQ9H2W1 248 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 C11orf68Q9H3H3 251 aaKnown RBP2.68□□□□□ -1.98
LINC00393-202ENST00000452852 ANAPC11Q9NYG5 84 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 COMMD3Q9UBI1 195 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 RABAC1Q9UI14 185 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 ANAPC10Q9UM13 185 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 YTHDF2Q9Y5A9 579 aaKnown RBP2.68□□□□□ -1.98
LINC00393-202ENST00000452852 BIRC6Q9NR09 4857 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
LINC00393-202ENST00000452852 TRAV30A0A087WSZ9 112 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 A0A087WXM4 84 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 TRAV8-3A0A0A6YYJ7 113 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 TRAV2A0A0B4J234 112 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 TRAV8-2A0A0B4J237 113 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 FAM25AB3EWG3 89 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 FAM25CB3EWG5 89 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 FAM25GB3EWG6 89 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 IGLL5B9A064 214 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 C8orf87E5RJ46 101 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 F5H768 121 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 DEFB4AO15263 64 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 DEDDO75618 318 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 LINC00869P0C866 280 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 MIFP14174 115 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 AP2S1P53680 142 aaPredicted RBP2.67□□□□□ -1.98
LINC00393-202ENST00000452852 PIGPP57054 158 aa2.67□□□□□ -1.98
LINC00393-202ENST00000452852 SNRPD3P62318 126 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms