RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 DKK4Q9UBT3 224 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 PRO0628Q9UI54 55 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 FER1L5A0AVI2 2057 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 DYSFO75923 2080 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 CACNA1DQ01668 2161 aa6.45□□□□□ -1.38
SMCO1-202ENST00000452776 COL6A3P12111 3177 aa6.44□□□□□ -1.38
SMCO1-202ENST00000452776 I3L2K1 104 aa6.44□□□□□ -1.38
SMCO1-202ENST00000452776 M0R3E3 92 aa6.44□□□□□ -1.38
SMCO1-202ENST00000452776 GATA1P15976 413 aaPredicted RBP6.44□□□□□ -1.38
SMCO1-202ENST00000452776 SPANXN1Q5VSR9 72 aa6.44□□□□□ -1.38
SMCO1-202ENST00000452776 FAM216BQ8N7L0 139 aa6.44□□□□□ -1.38
SMCO1-202ENST00000452776 RNF5Q99942 180 aa6.44□□□□□ -1.38
SMCO1-202ENST00000452776 TMEM223A0PJW6 202 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 LST1O00453 97 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 IGKV1-17P01599 117 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 MALP21145 153 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 MUSTN1Q8IVN3 82 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 C3orf56Q8N813 242 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 TIMM17AQ99595 171 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 ICOSQ9Y6W8 199 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 TRIOBPQ9H2D6 2365 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 GAS8-AS1O95177 125 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 ELANEP08246 267 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 CCL5P13501 91 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 ZNF80P51504 273 aaPredicted RBP6.43□□□□□ -1.38
SMCO1-202ENST00000452776 HIST1H4AP62805 103 aaKnown RBP6.43□□□□□ -1.38
SMCO1-202ENST00000452776 C10orf55Q5SWW7 151 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 Q6ZT83 130 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 ZNF575Q86XF7 245 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 RNF152Q8N8N0 203 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 DAND5Q8N907 189 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 C2orf48Q96LS8 159 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 MED12Q93074 2177 aa6.43□□□□□ -1.38
SMCO1-202ENST00000452776 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
SMCO1-202ENST00000452776 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
SMCO1-202ENST00000452776 PINLYPA6NC86 204 aa6.42□□□□□ -1.38
SMCO1-202ENST00000452776 CDX4O14627 284 aaPredicted RBP6.42□□□□□ -1.38
SMCO1-202ENST00000452776 TRIAP1O43715 76 aa6.42□□□□□ -1.38
SMCO1-202ENST00000452776 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
SMCO1-202ENST00000452776 IGHV1-2P23083 117 aa6.42□□□□□ -1.38
SMCO1-202ENST00000452776 GAFA1Q96PS6 74 aa6.42□□□□□ -1.38
SMCO1-202ENST00000452776 IGKV2-40A0A087WW87 121 aaPredicted RBP6.41□□□□□ -1.38
SMCO1-202ENST00000452776 IGKV2D-40P01614 121 aaPredicted RBP6.41□□□□□ -1.38
SMCO1-202ENST00000452776 DUX4L9Q6RFH8 374 aaPredicted RBP6.41□□□□□ -1.38
SMCO1-202ENST00000452776 Q6ZS46 218 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 DPH3P1Q9H4G8 78 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 IGLV4-69A0A075B6H9 119 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 H7C2G1 150 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 K7ENP7 123 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 NTN3O00634 580 aaPredicted RBP6.41□□□□□ -1.38
SMCO1-202ENST00000452776 NDUFC2O95298 119 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 IGLV1-44P01699 117 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 MED14OSP0DP75 135 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 MRPL53Q96EL3 112 aaKnown RBP6.41□□□□□ -1.38
SMCO1-202ENST00000452776 TTTY12Q9BZ98 90 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
SMCO1-202ENST00000452776 ENSAO43768 121 aaKnown RBP6.4□□□□□ -1.38
SMCO1-202ENST00000452776 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
SMCO1-202ENST00000452776 MRGPRG-AS1Q2M3A8 158 aa6.4□□□□□ -1.38
SMCO1-202ENST00000452776 DCANP1Q8TF63 244 aa6.4□□□□□ -1.38
SMCO1-202ENST00000452776 COPS9Q8WXC6 57 aa6.4□□□□□ -1.38
SMCO1-202ENST00000452776 AMELXQ99217 191 aa6.4□□□□□ -1.38
SMCO1-202ENST00000452776 KLK15Q9H2R5 256 aa6.4□□□□□ -1.38
SMCO1-202ENST00000452776 SIT1Q9Y3P8 196 aa6.4□□□□□ -1.38
SMCO1-202ENST00000452776 LENEPQ9Y5L5 61 aa6.4□□□□□ -1.38
SMCO1-202ENST00000452776 CABIN1Q9Y6J0 2220 aa6.4□□□□□ -1.39
SMCO1-202ENST00000452776 IGIPA6NJ69 53 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 TEX22C9J3V5 150 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 VCYO14598 125 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 ZNF876PQ49A33 203 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 RUSC1-AS1Q66K80 236 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 SPINK14Q6IE38 97 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 CEMP1Q6PRD7 247 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-202ENST00000452776 DEFB119Q8N690 84 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 PIMREGQ9BSJ6 248 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 ZFAND3Q9H8U3 227 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 JPT2Q9H910 190 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 hADV29S1A0JD25 119 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 IGHV1-69P01742 117 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 TRGV3P03979 118 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 ZNF22P17026 224 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-202ENST00000452776 C3orf36Q3SXR2 165 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 ASCL5Q7RTU5 278 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 PRORYQ9H606 182 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 BEX4Q9NWD9 120 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-202ENST00000452776 CTSZQ9UBR2 303 aa6.39□□□□□ -1.39
SMCO1-202ENST00000452776 IGHV3-21A0A0B4J1V1 117 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 IGKV3D-20A0A0C4DH25 116 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 IGHV7-4-1A0A0J9YVY3 117 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 K7EIM0 57 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 LYZL6O75951 148 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 PSMB8P28062 276 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 Q0VFX4 171 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 CFHR4Q92496 578 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 CCL13Q99616 98 aa6.38□□□□□ -1.39
SMCO1-202ENST00000452776 KLK5Q9Y337 293 aaPredicted RBP6.38□□□□□ -1.39
SMCO1-202ENST00000452776 IGHV4OR15-8A0A075B7B6 117 aa6.37□□□□□ -1.39
SMCO1-202ENST00000452776 A0A087WW49 117 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms