RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 STOML3Q8TAV4 291 aa12.8□□□□□ -0.36
PDLIM2-214ENST00000452226 MBD3L1Q8WWY6 194 aa12.8□□□□□ -0.36
PDLIM2-214ENST00000452226 SGK494Q96LW2 274 aa12.8□□□□□ -0.36
PDLIM2-214ENST00000452226 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
PDLIM2-214ENST00000452226 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
PDLIM2-214ENST00000452226 FBLL1A6NHQ2 334 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-214ENST00000452226 PFDN1O60925 122 aa12.79□□□□□ -0.36
PDLIM2-214ENST00000452226 C1QBP02746 253 aa12.79□□□□□ -0.36
PDLIM2-214ENST00000452226 UBE2G2P60604 165 aa12.79□□□□□ -0.36
PDLIM2-214ENST00000452226 MUC21Q5SSG8 566 aa12.79□□□□□ -0.36
PDLIM2-214ENST00000452226 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
PDLIM2-214ENST00000452226 TRAV21A0A0B4J279 112 aa12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 A0A0J9YY99 117 aa12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 F6UZH7 168 aa12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 TPT1P13693 172 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 HOXA5P20719 270 aa12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 FAM159AQ6UWV7 190 aa12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 DPPA3Q6W0C5 159 aa12.78□□□□□ -0.36
PDLIM2-214ENST00000452226 FAM213BQ8TBF2 198 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 HIST1H2BAQ96A08 127 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 LINC00479Q96M42 142 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 C8orf49Q96NF6 230 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 NDFIP1Q9BT67 221 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 Q9H8V8 135 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 MDFICQ9P1T7 246 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
PDLIM2-214ENST00000452226 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
PDLIM2-214ENST00000452226 C16orf90A8MZG2 172 aa12.76□□□□□ -0.37
PDLIM2-214ENST00000452226 IFNA7P01567 189 aa12.76□□□□□ -0.37
PDLIM2-214ENST00000452226 ZNF80P51504 273 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-214ENST00000452226 ZNF415Q09FC8 603 aa12.76□□□□□ -0.37
PDLIM2-214ENST00000452226 TRGV11A0A075B6L2 103 aa12.75□□□□□ -0.37
PDLIM2-214ENST00000452226 PEX7O00628 323 aa12.75□□□□□ -0.37
PDLIM2-214ENST00000452226 TMEM183BQ1AE95 376 aa12.75□□□□□ -0.37
PDLIM2-214ENST00000452226 SAPCD1Q5SSQ6 148 aa12.75□□□□□ -0.37
PDLIM2-214ENST00000452226 PRNTQ86SH4 94 aa12.75□□□□□ -0.37
PDLIM2-214ENST00000452226 TMEM183AQ8IXX5 376 aa12.75□□□□□ -0.37
PDLIM2-214ENST00000452226 SFT2D1Q8WV19 159 aa12.75□□□□□ -0.37
PDLIM2-214ENST00000452226 TRGV2A0A075B6R0 118 aa12.74□□□□□ -0.37
PDLIM2-214ENST00000452226 TRAV34A0A0B4J273 112 aa12.74□□□□□ -0.37
PDLIM2-214ENST00000452226 GCGP01275 180 aa12.74□□□□□ -0.37
PDLIM2-214ENST00000452226 SMUG1Q53HV7 270 aa12.74□□□□□ -0.37
PDLIM2-214ENST00000452226 AKAP14Q86UN6 197 aa12.74□□□□□ -0.37
PDLIM2-214ENST00000452226 TCEAL7Q9BRU2 100 aa12.74□□□□□ -0.37
PDLIM2-214ENST00000452226 SPXQ9BT56 116 aa12.74□□□□□ -0.37
PDLIM2-214ENST00000452226 hCG_2014768A0A024R1R8 64 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 H3BNG1 76 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 GNRH2O43555 120 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 CDK2AP2O75956 126 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 ESRGQ1W209 222 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 KCNS1Q96KK3 526 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 C11orf21Q9P2W6 132 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 NAGKQ9UJ70 344 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 HSPG2P98160 4391 aa12.73□□□□□ -0.37
PDLIM2-214ENST00000452226 IGHV3-16A0A0C4DH30 117 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 PAGE4O60829 102 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 TYMSP04818 313 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 PFN1P07737 140 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 H2AFB1P0C5Y9 115 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 PPT1P50897 306 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 RAB5CP51148 216 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 TTC32Q5I0X7 151 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 RASL10AQ92737 203 aa12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 MRPL16Q9NX20 251 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-214ENST00000452226 ABCA13Q86UQ4 5058 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 CST9LP1Q5W188 147 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 EIF5AL1Q6IS14 154 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 COX8CQ7Z4L0 72 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 Q86TA4 180 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 SLC51BQ86UW2 128 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 UPK3BQ9BT76 320 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 KRTAP1-5Q9BYS1 174 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 SDF2L1Q9HCN8 221 aa12.71□□□□□ -0.37
PDLIM2-214ENST00000452226 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.38
PDLIM2-214ENST00000452226 TRAV1-1A0A0B4J248 108 aa12.7□□□□□ -0.38
PDLIM2-214ENST00000452226 TRBV6-1A0A0K0K1D8 114 aa12.7□□□□□ -0.38
PDLIM2-214ENST00000452226 VSIG2Q96IQ7 327 aa12.7□□□□□ -0.38
PDLIM2-214ENST00000452226 MRPS16Q9Y3D3 137 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-214ENST00000452226 A0A1B0GV50 99 aa12.69□□□□□ -0.38
PDLIM2-214ENST00000452226 SULT1A2P50226 295 aa12.69□□□□□ -0.38
PDLIM2-214ENST00000452226 C9orf62Q8N4C0 152 aa12.69□□□□□ -0.38
PDLIM2-214ENST00000452226 FMC1Q96HJ9 113 aa12.69□□□□□ -0.38
PDLIM2-214ENST00000452226 ZFP30Q9Y2G7 519 aa12.69□□□□□ -0.38
PDLIM2-214ENST00000452226 A0A096LPF7 62 aa12.68□□□□□ -0.38
PDLIM2-214ENST00000452226 M0R2P5 195 aa12.68□□□□□ -0.38
PDLIM2-214ENST00000452226 MAPKAPK5-AS1Q8N8E1 139 aa12.68□□□□□ -0.38
PDLIM2-214ENST00000452226 KRTAP4-5Q9BYR2 181 aa12.68□□□□□ -0.38
PDLIM2-214ENST00000452226 A0A1B0GVG6 124 aa12.67□□□□□ -0.38
PDLIM2-214ENST00000452226 A0A1W2PPQ1 181 aa12.67□□□□□ -0.38
PDLIM2-214ENST00000452226 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
PDLIM2-214ENST00000452226 CRIP1P50238 77 aa12.67□□□□□ -0.38
PDLIM2-214ENST00000452226 CCL20P78556 96 aa12.67□□□□□ -0.38
PDLIM2-214ENST00000452226 FHL2Q14192 279 aa12.67□□□□□ -0.38
PDLIM2-214ENST00000452226 LTAP01374 205 aa12.66□□□□□ -0.38
PDLIM2-214ENST00000452226 IGHV3-53P01767 116 aa12.66□□□□□ -0.38
PDLIM2-214ENST00000452226 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
PDLIM2-214ENST00000452226 ZC2HC1AQ96GY0 325 aa12.66□□□□□ -0.38
PDLIM2-214ENST00000452226 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms