RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 Q6AWC8 147 aa11.44□□□□□ -0.58
PTPRN-209ENST00000451506 TMEM183AQ8IXX5 376 aa11.44□□□□□ -0.58
PTPRN-209ENST00000451506 TRAV4A0A0B4J268 109 aa11.43□□□□□ -0.58
PTPRN-209ENST00000451506 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
PTPRN-209ENST00000451506 LOC100131303A0A0U1RQF7 123 aa11.43□□□□□ -0.58
PTPRN-209ENST00000451506 PSCAO43653 123 aa11.43□□□□□ -0.58
PTPRN-209ENST00000451506 GIPP09681 153 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-209ENST00000451506 TIRAPP58753 221 aa11.43□□□□□ -0.58
PTPRN-209ENST00000451506 PAXXQ9BUH6 204 aa11.43□□□□□ -0.58
PTPRN-209ENST00000451506 FAM30AQ9NZY2 134 aa11.43□□□□□ -0.58
PTPRN-209ENST00000451506 TRGV11A0A075B6L2 103 aa11.42□□□□□ -0.58
PTPRN-209ENST00000451506 J3QL48 77 aa11.42□□□□□ -0.58
PTPRN-209ENST00000451506 LINC01556Q5JQF7 62 aa11.42□□□□□ -0.58
PTPRN-209ENST00000451506 FAM159AQ6UWV7 190 aa11.42□□□□□ -0.58
PTPRN-209ENST00000451506 Q8N814 137 aa11.42□□□□□ -0.58
PTPRN-209ENST00000451506 IBA57-AS1B1ANH7 110 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 CSN1S1P47710 185 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 TAS2R45P59539 299 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 RANP62826 216 aaKnown RBP11.41□□□□□ -0.58
PTPRN-209ENST00000451506 TDRG1Q3Y452 100 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 KHDC3LQ587J8 217 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 SH2D6Q7Z4S9 175 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 OR4C5Q8NGB2 326 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 SMIM3Q9BZL3 60 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 LENEPQ9Y5L5 61 aa11.41□□□□□ -0.58
PTPRN-209ENST00000451506 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
PTPRN-209ENST00000451506 DNAH8Q96JB1 4490 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 IGHV3-16A0A0C4DH30 117 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 M0R2P5 195 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 GNRH2O43555 120 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 OR7C2O60412 319 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 C1QBP02746 253 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 GATA1P15976 413 aaPredicted RBP11.39□□□□□ -0.59
PTPRN-209ENST00000451506 NHLRC2Q8NBF2 726 aa11.39□□□□□ -0.59
PTPRN-209ENST00000451506 PPT1P50897 306 aa11.38□□□□□ -0.59
PTPRN-209ENST00000451506 UBE2L3P68036 154 aaKnown RBP11.38□□□□□ -0.59
PTPRN-209ENST00000451506 ACOT6Q3I5F7 207 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-209ENST00000451506 TMED6Q8WW62 240 aa11.38□□□□□ -0.59
PTPRN-209ENST00000451506 Q9HAA7 133 aa11.38□□□□□ -0.59
PTPRN-209ENST00000451506 NAGKQ9UJ70 344 aa11.38□□□□□ -0.59
PTPRN-209ENST00000451506 INO80EQ8NBZ0 244 aaPredicted RBP11.37□□□□□ -0.59
PTPRN-209ENST00000451506 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
PTPRN-209ENST00000451506 KRTAP29-1A8MX34 341 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-209ENST00000451506 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
PTPRN-209ENST00000451506 Q6ZSA8 131 aa11.36□□□□□ -0.59
PTPRN-209ENST00000451506 OR2G3Q8NGZ4 309 aa11.36□□□□□ -0.59
PTPRN-209ENST00000451506 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-209ENST00000451506 TYMSP04818 313 aa11.35□□□□□ -0.59
PTPRN-209ENST00000451506 PFN1P07737 140 aaKnown RBP11.35□□□□□ -0.59
PTPRN-209ENST00000451506 SLC25A29Q8N8R3 303 aa11.35□□□□□ -0.59
PTPRN-209ENST00000451506 WFDC1Q9HC57 220 aa11.35□□□□□ -0.59
PTPRN-209ENST00000451506 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
PTPRN-209ENST00000451506 A0A1W2PPV4 95 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 IGHV3-30P01768 117 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 IGHV3-33P01772 117 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 PLA2G1BP04054 148 aaKnown RBP11.34□□□□□ -0.59
PTPRN-209ENST00000451506 IGHV3-30-3P0DP02 117 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 IGHV3-30-5P0DP03 117 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 WFDC2Q14508 124 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 OR10J3Q5JRS4 329 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 OR2T35Q8NGX2 323 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 TVP23CQ96ET8 276 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
PTPRN-209ENST00000451506 TRAV21A0A0B4J279 112 aa11.33□□□□□ -0.6
PTPRN-209ENST00000451506 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
PTPRN-209ENST00000451506 MBP02144 154 aa11.33□□□□□ -0.6
PTPRN-209ENST00000451506 LAGE3Q14657 143 aa11.33□□□□□ -0.6
PTPRN-209ENST00000451506 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
PTPRN-209ENST00000451506 FXYD6-FXYD2A0A087WZ82 144 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 TRBV6-4A0A1B0GX49 114 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 SERF2P84101 59 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 FAM74A1Q5RGS3 127 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 LELP1Q5T871 98 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 HSD17B11Q8NBQ5 300 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 SDF2L1Q9HCN8 221 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 TNFSF18Q9UNG2 199 aa11.32□□□□□ -0.6
PTPRN-209ENST00000451506 PGPA6NDG6 321 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 F6UZH7 168 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 RS1O15537 224 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 CDC34P49427 236 aaPredicted RBP11.31□□□□□ -0.6
PTPRN-209ENST00000451506 RAB2AP61019 212 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 RHOHQ15669 191 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 CFAP126Q5VTH2 177 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 DPPA3Q6W0C5 159 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 OR10G9Q8NGN4 311 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 OR10G7Q8NGN6 311 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 KCNS1Q96KK3 526 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 PRADC1Q9BSG0 188 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 TM2D2Q9BX73 214 aa11.31□□□□□ -0.6
PTPRN-209ENST00000451506 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 RNF222A6NCQ9 220 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 CIDEAO60543 219 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTPRN-209ENST00000451506 ATP6V0CP27449 155 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms