RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
VPS33A-202ENST00000451053 SH2D1AO60880 128 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 RNASE4P34096 147 aaKnown RBP9.44□□□□□ -0.9
VPS33A-202ENST00000451053 RNF212Q495C1 297 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 CT83Q5H943 113 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 Q6AWC8 147 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 ZNF705AQ6ZN79 300 aaPredicted RBP9.44□□□□□ -0.9
VPS33A-202ENST00000451053 NUDT10Q8NFP7 164 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 NUDT11Q96G61 164 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 C20orf144Q9BQM9 153 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 RNASE7Q9H1E1 156 aaKnown RBP9.44□□□□□ -0.9
VPS33A-202ENST00000451053 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
VPS33A-202ENST00000451053 TMEM242Q9NWH2 141 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 GOLT1BQ9Y3E0 138 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
VPS33A-202ENST00000451053 TRAV12-3A0A0B4J271 114 aa9.43□□□□□ -0.9
VPS33A-202ENST00000451053 XKRY2A2RUG3 117 aa9.43□□□□□ -0.9
VPS33A-202ENST00000451053 ZNF705GA8MUZ8 300 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-202ENST00000451053 CRIP1P50238 77 aa9.43□□□□□ -0.9
VPS33A-202ENST00000451053 ZNF80P51504 273 aaPredicted RBP9.43□□□□□ -0.9
VPS33A-202ENST00000451053 RPS20P60866 119 aaKnown RBP9.43□□□□□ -0.9
VPS33A-202ENST00000451053 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
VPS33A-202ENST00000451053 A8MWL6 223 aa9.42□□□□□ -0.9
VPS33A-202ENST00000451053 Q6ZQT7 251 aa9.42□□□□□ -0.9
VPS33A-202ENST00000451053 TMEM208Q9BTX3 173 aa9.42□□□□□ -0.9
VPS33A-202ENST00000451053 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 CXorf65A6NEN9 183 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 ORM1P02763 201 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 PRM2P04554 102 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 LINC01559Q495D7 138 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 TMEM256Q8N2U0 113 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 Q8NAQ8 132 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 OR2D3Q8NGH3 330 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 IMMP2LQ96T52 175 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 LINC01587Q99440 93 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 NEU1Q99519 415 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 V9GYV3 84 aa9.41□□□□□ -0.9
VPS33A-202ENST00000451053 DEFB4AO15263 64 aa9.4□□□□□ -0.9
VPS33A-202ENST00000451053 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
VPS33A-202ENST00000451053 CXCL1P09341 107 aa9.4□□□□□ -0.9
VPS33A-202ENST00000451053 S100PP25815 95 aa9.4□□□□□ -0.9
VPS33A-202ENST00000451053 KCNIP4Q6PIL6 250 aa9.4□□□□□ -0.9
VPS33A-202ENST00000451053 ATRAIDQ6UW56 229 aa9.4□□□□□ -0.9
VPS33A-202ENST00000451053 FAM159AQ6UWV7 190 aa9.4□□□□□ -0.9
VPS33A-202ENST00000451053 SMCO4Q9NRQ5 59 aa9.4□□□□□ -0.9
VPS33A-202ENST00000451053 HUWE1Q7Z6Z7 4374 aaKnown RBP9.4□□□□□ -0.9
VPS33A-202ENST00000451053 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 MIFP14174 115 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 GFRA4Q9GZZ7 299 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 IL36BQ9NZH7 164 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
VPS33A-202ENST00000451053 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 SMIM9A6NGZ8 99 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 HTN1P15515 57 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 AZU1P20160 251 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 RPL19P84098 196 aaKnown RBP9.38□□□□□ -0.91
VPS33A-202ENST00000451053 RRN3P1Q2M238 152 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 LINC00467Q9BRT7 94 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
VPS33A-202ENST00000451053 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
VPS33A-202ENST00000451053 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
VPS33A-202ENST00000451053 IGKV3D-20A0A0C4DH25 116 aa9.37□□□□□ -0.91
VPS33A-202ENST00000451053 A0A1W2PPQ1 181 aa9.37□□□□□ -0.91
VPS33A-202ENST00000451053 SMIM27A0A1W2PRY6 76 aa9.37□□□□□ -0.91
VPS33A-202ENST00000451053 MUC21Q5SSG8 566 aa9.37□□□□□ -0.91
VPS33A-202ENST00000451053 NAT8BQ9UHF3 227 aa9.37□□□□□ -0.91
VPS33A-202ENST00000451053 NBEAL2Q6ZNJ1 2754 aa9.36□□□□□ -0.91
VPS33A-202ENST00000451053 COL7A1Q02388 2944 aa9.36□□□□□ -0.91
VPS33A-202ENST00000451053 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
VPS33A-202ENST00000451053 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
VPS33A-202ENST00000451053 ANXA2RQ3ZCQ2 193 aa9.36□□□□□ -0.91
VPS33A-202ENST00000451053 BORCS7Q96B45 105 aa9.36□□□□□ -0.91
VPS33A-202ENST00000451053 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
VPS33A-202ENST00000451053 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
VPS33A-202ENST00000451053 CBY3A6NI87 242 aa9.35□□□□□ -0.91
VPS33A-202ENST00000451053 MED14OSP0DP75 135 aa9.35□□□□□ -0.91
VPS33A-202ENST00000451053 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
VPS33A-202ENST00000451053 ASIPP42127 132 aa9.35□□□□□ -0.91
VPS33A-202ENST00000451053 EMP1P54849 157 aa9.35□□□□□ -0.91
VPS33A-202ENST00000451053 FOXA3P55318 350 aaPredicted RBP9.35□□□□□ -0.91
VPS33A-202ENST00000451053 DNLZQ5SXM8 178 aa9.35□□□□□ -0.91
VPS33A-202ENST00000451053 TP53TG3Q9ULZ0 132 aa9.35□□□□□ -0.91
VPS33A-202ENST00000451053 HIGD1CA8MV81 97 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 F2Z2F3 143 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 SCO1O75880 301 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 TYMSP04818 313 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 TCL1AP56279 114 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 TMEM88Q6PEY1 159 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 CBLN2Q8IUK8 224 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.91
VPS33A-202ENST00000451053 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
VPS33A-202ENST00000451053 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms