RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 OR2T35Q8NGX2 323 aa11.05□□□□□ -0.64
SGCE-208ENST00000450385 PTH2Q96A98 100 aa11.05□□□□□ -0.64
SGCE-208ENST00000450385 HERC2O95714 4834 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 IGHV3-16A0A0C4DH30 117 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 RNF222A6NCQ9 220 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 HMGB3O15347 200 aaKnown RBP11.04□□□□□ -0.64
SGCE-208ENST00000450385 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
SGCE-208ENST00000450385 ZFP69Q49AA0 526 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 Q5BKY6 102 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 TVP23CQ96ET8 276 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 TXNDC17Q9BRA2 123 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 RPH3ALQ9UNE2 315 aa11.04□□□□□ -0.64
SGCE-208ENST00000450385 FXYD6-FXYD2A0A087WZ82 144 aa11.03□□□□□ -0.64
SGCE-208ENST00000450385 CTXND1A0A1B0GTU2 59 aa11.03□□□□□ -0.64
SGCE-208ENST00000450385 C9JCJ5 164 aa11.03□□□□□ -0.64
SGCE-208ENST00000450385 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
SGCE-208ENST00000450385 SMUG1Q53HV7 270 aa11.03□□□□□ -0.64
SGCE-208ENST00000450385 RPL7L1Q6DKI1 246 aaKnown RBP11.03□□□□□ -0.64
SGCE-208ENST00000450385 OR4C5Q8NGB2 326 aa11.03□□□□□ -0.64
SGCE-208ENST00000450385 PCNPQ8WW12 178 aaKnown RBP11.03□□□□□ -0.64
SGCE-208ENST00000450385 PSG8Q9UQ74 426 aa11.03□□□□□ -0.64
SGCE-208ENST00000450385 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 PPT1P50897 306 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 FLI1Q01543 452 aaPredicted RBP11.02□□□□□ -0.65
SGCE-208ENST00000450385 TNP2Q05952 138 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 LYPD5Q6UWN5 251 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 C8orf49Q96NF6 230 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 TCEAL7Q9BRU2 100 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 NAGKQ9UJ70 344 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 DNAH11Q96DT5 4516 aa11.02□□□□□ -0.65
SGCE-208ENST00000450385 GNRH2O43555 120 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 EIF3GO75821 320 aaKnown RBP eCLIP11.01□□□□□ -0.65
SGCE-208ENST00000450385 TYMSP04818 313 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 SRIP30626 198 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 TIRAPP58753 221 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 AKR1C8PQ5T2L2 129 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 NFE4Q86UQ8 179 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 HIST1H2BAQ96A08 127 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 ZNF479Q96JC4 524 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 SH3BGRL3Q9H299 93 aa11.01□□□□□ -0.65
SGCE-208ENST00000450385 GGTLC3B5MD39 225 aa11□□□□□ -0.65
SGCE-208ENST00000450385 K7EQD1 137 aa11□□□□□ -0.65
SGCE-208ENST00000450385 IGLV2-11P01706 119 aa11□□□□□ -0.65
SGCE-208ENST00000450385 GNG5P63218 68 aa11□□□□□ -0.65
SGCE-208ENST00000450385 KIAA1109Q2LD37 5005 aa10.99□□□□□ -0.65
SGCE-208ENST00000450385 NXPH4O95158 308 aa10.99□□□□□ -0.65
SGCE-208ENST00000450385 GCGP01275 180 aa10.99□□□□□ -0.65
SGCE-208ENST00000450385 ARL2-SNX15V9GYD0 113 aa10.99□□□□□ -0.65
SGCE-208ENST00000450385 DYNC1H1Q14204 4646 aaKnown RBP10.99□□□□□ -0.65
SGCE-208ENST00000450385 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 F6UZH7 168 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 GYPEP15421 78 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 FHITP49789 147 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 ZNF345Q14585 488 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 ZNF876PQ49A33 203 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 STOML3Q8TAV4 291 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 ZFP30Q9Y2G7 519 aa10.98□□□□□ -0.65
SGCE-208ENST00000450385 C16orf90A8MZG2 172 aa10.97□□□□□ -0.65
SGCE-208ENST00000450385 CDK2AP2O75956 126 aa10.97□□□□□ -0.65
SGCE-208ENST00000450385 IFNA7P01567 189 aa10.97□□□□□ -0.65
SGCE-208ENST00000450385 SFTA3P0C7M3 94 aa10.97□□□□□ -0.65
SGCE-208ENST00000450385 COX8CQ7Z4L0 72 aa10.97□□□□□ -0.65
SGCE-208ENST00000450385 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
SGCE-208ENST00000450385 LY96Q9Y6Y9 160 aa10.97□□□□□ -0.65
SGCE-208ENST00000450385 TRBV6-4A0A1B0GX49 114 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 FAM74A7A6NL05 159 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 HMSDA8MTL9 139 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 G3V3Q6 166 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 GATA1P15976 413 aaPredicted RBP10.96□□□□□ -0.65
SGCE-208ENST00000450385 EVI2AP22794 236 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 ZNF80P51504 273 aaPredicted RBP10.96□□□□□ -0.65
SGCE-208ENST00000450385 ZNF726P1Q15940 193 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 C9orf85Q96MD7 179 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.65
SGCE-208ENST00000450385 A0A0D9SG52 128 aa10.95□□□□□ -0.66
SGCE-208ENST00000450385 UMAD1C9J7I0 102 aa10.95□□□□□ -0.66
SGCE-208ENST00000450385 EREGO14944 169 aa10.95□□□□□ -0.66
SGCE-208ENST00000450385 ARPC5O15511 151 aa10.95□□□□□ -0.66
SGCE-208ENST00000450385 RS1O15537 224 aa10.95□□□□□ -0.66
SGCE-208ENST00000450385 SGK494Q96LW2 274 aa10.95□□□□□ -0.66
SGCE-208ENST00000450385 CYTL1Q9NRR1 136 aa10.95□□□□□ -0.66
SGCE-208ENST00000450385 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 PEX7O00628 323 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 SEC11BP0C7V7 166 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 MGST1P10620 155 aaKnown RBP10.94□□□□□ -0.66
SGCE-208ENST00000450385 LINC00315P59091 139 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 EIF5AP63241 154 aaKnown RBP10.94□□□□□ -0.66
SGCE-208ENST00000450385 DNLZQ5SXM8 178 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 CFAP126Q5VTH2 177 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 ZFP2Q6ZN57 461 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 KCNRGQ8N5I3 272 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 FMC1Q96HJ9 113 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms