RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 CD7P09564 240 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 IGLL1P15814 213 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 FOXA3P55318 350 aaPredicted RBP7.17□□□□□ -1.26
RFC4-210ENST00000449502 SSTP61278 116 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 CACNG7P62955 275 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 TWIST1Q15672 202 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 LYZL1Q6UWQ5 148 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 ZFP82Q8N141 532 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 CLUHP3Q96NS8 147 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 TMEM208Q9BTX3 173 aa7.17□□□□□ -1.26
RFC4-210ENST00000449502 ZMAT5Q9UDW3 170 aaKnown RBP7.17□□□□□ -1.26
RFC4-210ENST00000449502 TRGV11A0A075B6L2 103 aa7.16□□□□□ -1.26
RFC4-210ENST00000449502 APCSP02743 223 aa7.16□□□□□ -1.26
RFC4-210ENST00000449502 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
RFC4-210ENST00000449502 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
RFC4-210ENST00000449502 AMTNQ6UX39 209 aa7.16□□□□□ -1.26
RFC4-210ENST00000449502 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
RFC4-210ENST00000449502 IGHV1OR15-1A0A075B7D0 117 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 RBMY1BA6NDE4 496 aaKnown RBP7.15□□□□□ -1.26
RFC4-210ENST00000449502 RBMY1EA6NEQ0 496 aaKnown RBP7.15□□□□□ -1.26
RFC4-210ENST00000449502 CBY3A6NI87 242 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 A8MTW9 85 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 H3BVH4 76 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 RBMY1DP0C7P1 496 aaKnown RBP7.15□□□□□ -1.26
RFC4-210ENST00000449502 ARMS2P0C7Q2 107 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 RPL35AP18077 110 aaKnown RBP7.15□□□□□ -1.26
RFC4-210ENST00000449502 CTRLP40313 264 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 PRR31Q5SQ13 230 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 MORN3Q6PF18 240 aaPredicted RBP7.15□□□□□ -1.26
RFC4-210ENST00000449502 TRPT1Q86TN4 253 aaKnown RBP7.15□□□□□ -1.26
RFC4-210ENST00000449502 LINC01587Q99440 93 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 C20orf144Q9BQM9 153 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 C1QTNF4Q9BXJ3 329 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 C11orf21Q9P2W6 132 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 PHLDA3Q9Y5J5 127 aa7.15□□□□□ -1.26
RFC4-210ENST00000449502 MUC21A0A0G2JKD1 596 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 MUC21A0A140T8X8 626 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 GNRH2O43555 120 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 ZNF324O75467 553 aaPredicted RBP7.14□□□□□ -1.27
RFC4-210ENST00000449502 OR5AL1P0C617 328 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 IGLC6P0CF74 106 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 HTN1P15515 57 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 TMEM136Q6ZRR5 245 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 DEFB125Q8N687 156 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 XCL2Q9UBD3 114 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 GOLT1BQ9Y3E0 138 aa7.14□□□□□ -1.27
RFC4-210ENST00000449502 IGHV3OR16-12A0A075B7B8 117 aa7.13□□□□□ -1.27
RFC4-210ENST00000449502 A0A1B0GXF2 115 aa7.13□□□□□ -1.27
RFC4-210ENST00000449502 TRGC1P0CF51 173 aa7.13□□□□□ -1.27
RFC4-210ENST00000449502 NTF3P20783 257 aa7.13□□□□□ -1.27
RFC4-210ENST00000449502 Q6ZQT7 251 aa7.13□□□□□ -1.27
RFC4-210ENST00000449502 TMEM256Q8N2U0 113 aa7.13□□□□□ -1.27
RFC4-210ENST00000449502 SPATA3Q8NHX4 192 aa7.13□□□□□ -1.27
RFC4-210ENST00000449502 NSD1Q96L73 2696 aaPredicted RBP7.12□□□□□ -1.27
RFC4-210ENST00000449502 M0R381 172 aa7.12□□□□□ -1.27
RFC4-210ENST00000449502 SNAI2O43623 268 aa7.12□□□□□ -1.27
RFC4-210ENST00000449502 NDUFA6P56556 154 aa7.12□□□□□ -1.27
RFC4-210ENST00000449502 TDRG1Q3Y452 100 aa7.12□□□□□ -1.27
RFC4-210ENST00000449502 WFDC10AQ9H1F0 79 aa7.12□□□□□ -1.27
RFC4-210ENST00000449502 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
RFC4-210ENST00000449502 LOC102724200A0A096LPH7 203 aaPredicted RBP7.11□□□□□ -1.27
RFC4-210ENST00000449502 CRXO43186 299 aaPredicted RBP7.11□□□□□ -1.27
RFC4-210ENST00000449502 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 SMIM17P0DL12 118 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 ZNF415Q09FC8 603 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 DNLZQ5SXM8 178 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 Q8N1Y9 231 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 OR10AG1Q8NH19 301 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 SSBP4Q9BWG4 385 aaPredicted RBP7.11□□□□□ -1.27
RFC4-210ENST00000449502 CNFNQ9BYD5 112 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 CSTL1Q9H114 145 aa7.11□□□□□ -1.27
RFC4-210ENST00000449502 C2CD3Q4AC94 2353 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 IGHV4-4A0A075B6R2 117 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 WIPF1O43516 503 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BKO60814 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BJP06899 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BOP23527 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BBP33778 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 APOC4P55056 127 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BDP58876 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BCP62807 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST2H2BEQ16778 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.1□□□□□ -1.27
RFC4-210ENST00000449502 ZNF493Q6ZR52 646 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 BAGE3Q86Y29 109 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BHQ93079 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 AP1S3Q96PC3 154 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BNQ99877 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 HIST1H2BMQ99879 126 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 LINC00467Q9BRT7 94 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 TMEM191AQ9H0A3 160 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 TP53TG3Q9ULZ0 132 aa7.1□□□□□ -1.27
RFC4-210ENST00000449502 RNASE3P12724 160 aaKnown RBP7.09□□□□□ -1.27
RFC4-210ENST00000449502 SRIP30626 198 aa7.09□□□□□ -1.27
RFC4-210ENST00000449502 SLAQ13239 276 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms